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Protein
Submitted name:

Choline transporter-like protein 4 isoform 1

Gene

SLC44A4

Organism
Callithrix jacchus (White-tufted-ear marmoset)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Choline transporter-like protein 4 isoform 1Imported
Gene namesi
Name:SLC44A4Imported
OrganismiCallithrix jacchus (White-tufted-ear marmoset)Imported
Taxonomic identifieri9483 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniPlatyrrhiniCebidaeCallitrichinaeCallithrixCallithrix

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei34 – 57HelicalSequence analysisAdd BLAST24
Transmembranei228 – 249HelicalSequence analysisAdd BLAST22
Transmembranei256 – 276HelicalSequence analysisAdd BLAST21
Transmembranei308 – 329HelicalSequence analysisAdd BLAST22
Transmembranei355 – 379HelicalSequence analysisAdd BLAST25
Transmembranei455 – 475HelicalSequence analysisAdd BLAST21
Transmembranei496 – 518HelicalSequence analysisAdd BLAST23
Transmembranei558 – 581HelicalSequence analysisAdd BLAST24
Transmembranei593 – 617HelicalSequence analysisAdd BLAST25
Transmembranei637 – 670HelicalSequence analysisAdd BLAST34

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi9483.ENSCJAP00000034605

Family & Domainsi

Sequence similaritiesi

Belongs to the CTL (choline transporter-like) family.SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG1362 Eukaryota
ENOG410XS0P LUCA
KOiK15377
OMAiNFCLPGV
OrthoDBiEOG091G04CQ
TreeFamiTF313325

Family and domain databases

InterProiView protein in InterPro
IPR007603 Choline_transptr-like
PANTHERiPTHR12385 PTHR12385, 1 hit
PfamiView protein in Pfam
PF04515 Choline_transpo, 1 hit

Sequencei

Sequence statusi: Complete.

F7HWM4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGGKRDKDDE AYGKPVKYDP SFRGPIKNRS CTDVICCVLF LLFILGYIVV
60 70 80 90 100
GIVAWVYGDP RQVLYPRNST GAYCGMGENK DKPYLLYFNI FSCILSTNII
110 120 130 140 150
SVAENGLQCP TPQVCVSSCP EAPWTVENSQ FLQTVGEVFY TKNRNFCLPG
160 170 180 190 200
VPWNMRVITS LQQELCPSFL LPSAPALGRC FPWTNVTPPV LPGITNDTTI
210 220 230 240 250
EQGISGLIDS LNARDISVKI FEDFAQSWYW ILVALGVALV LSLLFILLLR
260 270 280 290 300
LVAGPLVLVL ILGVLGVLAY GIYYCWEEYR VLRDKGASIS QLGFTTNLSA
310 320 330 340 350
YRSVQETWLA ALIVLAVLEA ILLLVLIFLR QRIRIAIALL KEASKAVGHM
360 370 380 390 400
MSTMFYPLVT FVLLLICIAY WAMTALYLAT SGQPQYVLWA SNVSSPGCEN
410 420 430 440 450
VPINTSCNPM VQPVNSSCPG LMCIFQGYSS TGLVQRSLFN LQIYGVLGLF
460 470 480 490 500
WTLNWVLALG QCVLAGAFAS FYWAFHKPQD IPTFPLFSAF IRTLRYHTGS
510 520 530 540 550
LAFGALILTL VQIARVILEY IDHKLRGVQN PVARCIMCCF KCCLWCLEKF
560 570 580 590 600
IKFLNRNAYI MIAIYGKNFC VSAKNAFMLL MRNIVRVVVL DKVTDLLLFF
610 620 630 640 650
GKLLVVGGVG VLSFYFFSGR IQGLGKDFES PHLNYYWLPI MTSILGAYVI
660 670 680 690 700
ASGFFSVFGM CVDTLFLCFL EDLERNDGSL DRPYYMSKSL LKILGKKNEV

PPGNKKRKK
Length:709
Mass (Da):79,271
Last modified:July 27, 2011 - v1
Checksum:i341D24675D290AF1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GAMT01006124 mRNA Translation: JAB05737.1
GAMT01006123 mRNA Translation: JAB05738.1
GAMT01006122 mRNA Translation: JAB05739.1
RefSeqiXP_002746409.1, XM_002746363.2

Genome annotation databases

GeneIDi100407887
KEGGicjc:100407887

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GAMT01006124 mRNA Translation: JAB05737.1
GAMT01006123 mRNA Translation: JAB05738.1
GAMT01006122 mRNA Translation: JAB05739.1
RefSeqiXP_002746409.1, XM_002746363.2

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9483.ENSCJAP00000034605

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi100407887
KEGGicjc:100407887

Organism-specific databases

CTDi80736

Phylogenomic databases

eggNOGiKOG1362 Eukaryota
ENOG410XS0P LUCA
KOiK15377
OMAiNFCLPGV
OrthoDBiEOG091G04CQ
TreeFamiTF313325

Family and domain databases

InterProiView protein in InterPro
IPR007603 Choline_transptr-like
PANTHERiPTHR12385 PTHR12385, 1 hit
PfamiView protein in Pfam
PF04515 Choline_transpo, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiF7HWM4_CALJA
AccessioniPrimary (citable) accession number: F7HWM4
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: November 7, 2018
This is version 39 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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