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Protein
Submitted name:

Nucleoporin 50

Gene

NUP50

Organism
Ornithorhynchus anatinus (Duckbill platypus)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Nucleoporin 50Imported
Gene namesi
Name:NUP50Imported
OrganismiOrnithorhynchus anatinus (Duckbill platypus)Imported
Taxonomic identifieri9258 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaMonotremataOrnithorhynchidaeOrnithorhynchus
Proteomesi
  • UP000002279 Componenti: Unplaced

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSOANG00000015792

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9258.ENSOANP00000024896

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini348 – 471RanBD1InterPro annotationAdd BLAST124

Phylogenomic databases

eggNOGiKOG2724 Eukaryota
ENOG410YPHB LUCA
GeneTreeiENSGT00440000035348
InParanoidiF7FXH4
KOiK14295
OrthoDBiEOG091G0HML
TreeFamiTF106504

Family and domain databases

Gene3Di2.30.29.30, 1 hit
InterProiView protein in InterPro
IPR015007 NUP2/50/61
IPR011993 PH-like_dom_sf
IPR000156 Ran_bind_dom
PfamiView protein in Pfam
PF08911 NUP50, 1 hit
PF00638 Ran_BP1, 1 hit
SMARTiView protein in SMART
SM00160 RanBD, 1 hit

Sequencei

Sequence statusi: Complete.

F7FXH4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKRNAEKEL TDRNWDQEEE VEEVGTFSVA SEEVLKNRAI KKAKRRNVGF
60 70 80 90 100
ESESGGAFKG FKGLVASGGG GFGGFGNGTG GKPLEGLSNG GSGIGGSSAL
110 120 130 140 150
SGPPSFANLK AAPEAKASSF GSGPANGPGP TTSPVEKKAS GSKTNSDGQG
160 170 180 190 200
AAATAGGSGG SGSGRACGAS AYHKQLAALN CSVRDWIVKH VNTNPLCDLT
210 220 230 240 250
PVFKDYAKYL AGIEQQPGGS SDSGSESEGS RKPSGPPPPP GSARPQQGSA
260 270 280 290 300
FLFHGSKTDG PADTGAEKKE EPVAGSFHFG KKVDSSALGA LGSGPLPSFS
310 320 330 340 350
FSPGGSGLFG KDAGQGKPAS TPFSASSQEG RPEGAGSDRA GGDEEESEEP
360 370 380 390 400
PTVIVNEVRE EDAFYSKKCK LFYKKDNEYK EKGVGTLHLK PAGKQKTQLL
410 420 430 440 450
VRADTNLGNI LLNVLIPPKM PCTRTGKNNV LIVCVPNPPI DEKNATVPVP
460 470
MLIRVKTSKD ADELHKILLE KKEA
Length:474
Mass (Da):48,801
Last modified:January 9, 2013 - v2
Checksum:iC33FA81096987DBF
GO

Sequence databases

RefSeqiXP_001505805.1, XM_001505755.3

Genome annotation databases

EnsembliENSOANT00000024900; ENSOANP00000024896; ENSOANG00000015792
GeneIDi100080095
KEGGioaa:100080095

Similar proteinsi

Entry informationi

Entry nameiF7FXH4_ORNAN
AccessioniPrimary (citable) accession number: F7FXH4
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: January 9, 2013
Last modified: May 23, 2018
This is version 47 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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