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Protein
Submitted name:

Uncharacterized protein

Gene

TWISTNB

Organism
Monodelphis domestica (Gray short-tailed opossum)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:TWISTNBImported
OrganismiMonodelphis domestica (Gray short-tailed opossum)Imported
Taxonomic identifieri13616 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaMetatheriaDidelphimorphiaDidelphidaeMonodelphis
Proteomesi
  • UP000002280 Componenti: Chromosome 8

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSMODG00000001402 Expressed in 7 organ(s), highest expression level in female gonad

Interactioni

Protein-protein interaction databases

STRINGi13616.ENSMODP00000001692

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini170 – 238SHS2_Rpb7-NInterPro annotationAdd BLAST69

Phylogenomic databases

eggNOGiKOG4134 Eukaryota
ENOG4111JD4 LUCA
GeneTreeiENSGT00390000005553
InParanoidiF7F5A4
KOiK03004
OrthoDBiEOG091G0JWK
TreeFamiTF325602

Family and domain databases

Gene3Di3.30.1490.120, 1 hit
InterProiView protein in InterPro
IPR036898 RNA_pol_Rpb7-like_N_sf
IPR005576 RNA_pol_Rpb7_N
PfamiView protein in Pfam
PF03876 SHS2_Rpb7-N, 1 hit

Sequencei

Sequence statusi: Complete.

F7F5A4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MHTRTHIQTR RLRVLCQSLE HPQGGASILR TCAQGERRKE RKEMRMEIRG
60 70 80 90 100
NSLRMLCACP CICGTWTPSG GRPAARHGVV PFPLLVTRRQ GVGLGELREW
110 120 130 140 150
RVHARRKLFT SLSRAEARGQ RKKWVRAGRR MAVSGPAGPG SGSGLQLPTF
160 170 180 190 200
AAARALVKPG SCLSVGPHRR HVALAPRFLD RKRSGLREQL DRELLRYSES
210 220 230 240 250
LRGVPVAYDN LKIVGELGDI YDDQGHVHLN VEADFVVFCP ERGQRLLGTV
260 270 280 290 300
NKVAPSHLGC LVHGCFNASI PKPEHMPAEQ WQGLHFHVGD ELEFEVSRLD
310 320 330 340 350
SDAAGVFCIR GALIVSSLPP VFPALPEGSE NAGHEPEPGI GEEKPKKKSK
360 370 380 390 400
KDLKQPRLDG GLKEAAAPSD EAGTVEIDPQ AQEAVNGLCE EEQEPPAKKK
410 420 430 440 450
RHREEPEQDP LWHASDSSGY QSDHQKKKKK RKKHSDEPEG PVAPEEPRPK

RKKKKE
Length:456
Mass (Da):50,623
Last modified:January 9, 2013 - v2
Checksum:i5B2BD025E571DBDE
GO

Sequence databases

RefSeqiXP_007505471.1, XM_007505409.2

Genome annotation databases

EnsembliENSMODT00000001727; ENSMODP00000001692; ENSMODG00000001402
GeneIDi100019193
KEGGimdo:100019193

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_007505471.1, XM_007505409.2

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi13616.ENSMODP00000001692

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMODT00000001727; ENSMODP00000001692; ENSMODG00000001402
GeneIDi100019193
KEGGimdo:100019193

Organism-specific databases

CTDi221830

Phylogenomic databases

eggNOGiKOG4134 Eukaryota
ENOG4111JD4 LUCA
GeneTreeiENSGT00390000005553
InParanoidiF7F5A4
KOiK03004
OrthoDBiEOG091G0JWK
TreeFamiTF325602

Gene expression databases

BgeeiENSMODG00000001402 Expressed in 7 organ(s), highest expression level in female gonad

Family and domain databases

Gene3Di3.30.1490.120, 1 hit
InterProiView protein in InterPro
IPR036898 RNA_pol_Rpb7-like_N_sf
IPR005576 RNA_pol_Rpb7_N
PfamiView protein in Pfam
PF03876 SHS2_Rpb7-N, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiF7F5A4_MONDO
AccessioniPrimary (citable) accession number: F7F5A4
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: January 9, 2013
Last modified: October 10, 2018
This is version 36 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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