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Protein
Submitted name:

VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog

Gene

VIPAS39

Organism
Equus caballus (Horse)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homologImported
Gene namesi
Name:VIPAS39Imported
OrganismiEquus caballus (Horse)Imported
Taxonomic identifieri9796 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaPerissodactylaEquidaeEquus
Proteomesi
  • UP000002281 Componenti: Chromosome 24

Organism-specific databases

VGNCiVGNC:24907 VIPAS39

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiF7DXH4

Expressioni

Gene expression databases

BgeeiENSECAG00000019439

Interactioni

Protein-protein interaction databases

STRINGi9796.ENSECAP00000017388

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini177 – 277Vps16_CInterPro annotationAdd BLAST101

Phylogenomic databases

eggNOGiKOG4677 Eukaryota
ENOG410XR4F LUCA
GeneTreeiENSGT00390000013955
InParanoidiF7DXH4
OMAiSMHDGNV
OrthoDBiEOG091G05QQ
TreeFamiTF319640

Family and domain databases

Gene3Di1.10.150.780, 1 hit
InterProiView protein in InterPro
IPR006925 Vps16_C
IPR038132 Vps16_C_sf
PfamiView protein in Pfam
PF04840 Vps16_C, 1 hit

Sequencei

Sequence statusi: Complete.

F7DXH4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNRTKGDEEE YWNSSKFKAF TFDDEDDELS QLKESKRAVN SLRDFVDDDD
60 70 80 90 100
DDDLERVSWG GEPVGSISWS IKETAGTSVS NHEGREQLKS RNSFSSYAPL
110 120 130 140 150
PKPTSTYSLS SFFRGRTRPG SFQSLSDALS DTPAKSYAPE LGRPKGEYRD
160 170 180 190 200
YSNDWSPSDT VRRLRKGKVC SLERFRSLQD KLQLLEEAVS MHDGNVITAV
210 220 230 240 250
LIFLKRTLSK EILFRELEVR QVALRHLIHF LKEIGDQKLL LDLFRFLDRT
260 270 280 290 300
EELALSHYRE HLNIQDPEKR KEFLKTCIGL PFSAEDSAHI QDHYTLLERQ
310 320 330 340 350
IIIEANDRHL EAAGQTEMFR KHPRKASILN MPLVTTLFYS CFYHYTEAEG
360 370 380 390 400
TFSSPVNLKK TFKIPDKQYV LTALAARAKL RAWHDVDALF TTKNWLGYTK
410 420 430 440 450
KRAPIGFHRV VEILHKNSAP VQILQEYVNL VEDVDTKLNL ATKFKCHDIV
460 470 480 490
IDTCRDLKDR QQLLAYRSKV DKGSAEEEKI DAILHSSQIR WKN
Length:493
Mass (Da):56,988
Last modified:July 27, 2011 - v1
Checksum:i4CCE1B301B33CC94
GO

Sequence databases

RefSeqiXP_001493759.1, XM_001493709.3
XP_005605434.1, XM_005605377.2
XP_005605435.1, XM_005605378.2

Genome annotation databases

EnsembliENSECAT00000021132; ENSECAP00000017388; ENSECAG00000019439
GeneIDi100052315
KEGGiecb:100052315

Similar proteinsi

Entry informationi

Entry nameiF7DXH4_HORSE
AccessioniPrimary (citable) accession number: F7DXH4
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: March 28, 2018
This is version 34 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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