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Protein
Submitted name:

Pumilio RNA binding family member 3

Gene

PUM3

Organism
Callithrix jacchus (White-tufted-ear marmoset)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Pumilio RNA binding family member 3Imported
Submitted name:
Pumilio domain-containing protein KIAA0020Imported
Gene namesi
Name:PUM3Imported
Synonyms:KIAA0020Imported
OrganismiCallithrix jacchus (White-tufted-ear marmoset)Imported
Taxonomic identifieri9483 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniPlatyrrhiniCebidaeCallitrichinaeCallithrixCallithrix
Proteomesi
  • UP000008225 Componenti: Unplaced

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi9483.ENSCJAP00000020282

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini136 – 509PUM-HDInterPro annotationAdd BLAST374
Repeati163 – 199PumilioPROSITE-ProRule annotationAdd BLAST37
Repeati200 – 235PumilioPROSITE-ProRule annotationAdd BLAST36
Repeati349 – 384PumilioPROSITE-ProRule annotationAdd BLAST36
Repeati423 – 459PumilioPROSITE-ProRule annotationAdd BLAST37
Repeati492 – 530PumilioPROSITE-ProRule annotationAdd BLAST39

Keywords - Domaini

RepeatSAAS annotation

Phylogenomic databases

eggNOGiKOG2050 Eukaryota
ENOG410XSHY LUCA
GeneTreeiENSGT00390000015757
KOiK14844
OMAiREWYGPE
OrthoDBiEOG091G06QP
TreeFamiTF312954

Family and domain databases

Gene3Di1.25.10.10, 1 hit
InterProiView protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR012959 CPL_dom
IPR033133 PUM-HD
IPR001313 Pumilio_RNA-bd_rpt
PfamiView protein in Pfam
PF08144 CPL, 1 hit
SMARTiView protein in SMART
SM00025 Pumilio, 6 hits
SUPFAMiSSF48371 SSF48371, 2 hits
PROSITEiView protein in PROSITE
PS50302 PUM, 5 hits
PS50303 PUM_HD, 1 hit

Sequencei

Sequence statusi: Complete.

F7DKZ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEVKGKKQFT GKSTKTSQEK PRFHKNSDSG SSKKFPRKVA KEGGSKITSN
60 70 80 90 100
NFEKNITKPG KKGVKQFKNK QQGDKSPKNK FQKANKFNKK RKFQPDSKSD
110 120 130 140 150
ESAAKKPKWD DFKKKKKELK QSRQLSDKTN YDIVVRAKQI WEILRRKDCD
160 170 180 190 200
KEKRVKLMSD LQKLIQGKIK TIAFAHDSTR VIQCYIQYGD DKQRKQAFEE
210 220 230 240 250
LQGDLIELSK AKYSRNIVKK FLMYGSKPQI AEIIRSFKGH VRKMLRHAEA
260 270 280 290 300
SAIVEYAYND KAILEQRNML TEELYGNTFQ LYKSADHPTL DKVLEVRPEK
310 320 330 340 350
LELIMDEMKQ ILTPMAQKEA VIKHSLVHKV FLDFFTYAPP KLRSEMIEAI
360 370 380 390 400
REAVVYLAHT HDGARVAMHC LWHGTPKDRK VIVKTMKTYI EKVANGQYSH
410 420 430 440 450
LVLLAAFDCI DDTKLVKQII VSEIISSLPS IVNDKYGRKV LLYLLSPRDP
460 470 480 490 500
AHTVREIIEV LQKGDGNAHS KKDTEVRRRE LLESISPALL SYLQEHTQEV
510 520 530 540 550
VLDKSACVLV SDILGSATGD VQPAMNAIAS LAATELHPGG KDGELHIAEH
560 570 580 590 600
PAGHLVLKWL IEQDKKMKEN GREGCFAKTL VEHVGMKSLK SWASINRGAI
610 620 630 640
ILSSLLQSCD PEVANKVKAA LKSLIPALEK TKSTSKGVEA LLEKLTT
Length:647
Mass (Da):73,351
Last modified:July 27, 2011 - v1
Checksum:i63A748AC8C929013
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ACFV01015244 Genomic DNA No translation available.
GAMT01009578 mRNA Translation: JAB02283.1
GAMS01010088 mRNA Translation: JAB13048.1
GAMR01008286 mRNA Translation: JAB25646.1
GAMQ01002543 mRNA Translation: JAB39308.1
GAMP01001568 mRNA Translation: JAB51187.1
RefSeqiXP_002742942.1, XM_002742896.3
XP_017828855.1, XM_017973366.1

Genome annotation databases

EnsembliENSCJAT00000021427; ENSCJAP00000020282; ENSCJAG00000010917
GeneIDi100403964
KEGGicjc:100403964

Similar proteinsi

Entry informationi

Entry nameiF7DKZ0_CALJA
AccessioniPrimary (citable) accession number: F7DKZ0
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: June 20, 2018
This is version 38 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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