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Protein
Submitted name:

Single-pass membrane protein with aspartate rich tail 1

Gene

SMDT1

Organism
Equus caballus (Horse)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Single-pass membrane protein with aspartate rich tail 1Imported
Gene namesi
Name:SMDT1Imported
OrganismiEquus caballus (Horse)Imported
Taxonomic identifieri9796 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaPerissodactylaEquidaeEquus
Proteomesi
  • UP000002281 Componenti: Chromosome 28

Organism-specific databases

VGNCiVGNC:23337 SMDT1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei66 – 84HelicalSequence analysisAdd BLAST19

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiF7BCC8

Expressioni

Gene expression databases

BgeeiENSECAG00000022508

Interactioni

Protein-protein interaction databases

STRINGi9796.ENSECAP00000019908

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG4542 Eukaryota
ENOG4112ABK LUCA
GeneTreeiENSGT00390000017489
InParanoidiF7BCC8
OMAiTETGAIC
OrthoDBiEOG091G13VT
TreeFamiTF314649

Family and domain databases

InterProiView protein in InterPro
IPR018782 MCU_reg
PANTHERiPTHR33904 PTHR33904, 1 hit
PfamiView protein in Pfam
PF10161 DDDD, 1 hit

Sequencei

Sequence statusi: Complete.

F7BCC8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASGAARWLA LAPLRCGALR SGPNWRKGGE VSAGRGGPGR TLVPWRSVIV
60 70 80 90 100
TRSGAILPKP VKMSFGLLRV FSIVIPFLYV GTLISKNFAA LLEEHDIFVP

EDDDDDD
Length:107
Mass (Da):11,548
Last modified:July 27, 2011 - v1
Checksum:i2BC874F8077A7129
GO

Sequence databases

RefSeqiXP_001502777.1, XM_001502727.5

Genome annotation databases

EnsembliENSECAT00000023990; ENSECAP00000019908; ENSECAG00000022508
GeneIDi100056050
KEGGiecb:100056050

Similar proteinsi

Entry informationi

Entry nameiF7BCC8_HORSE
AccessioniPrimary (citable) accession number: F7BCC8
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 25, 2018
This is version 36 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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