UniProtKB - F6YB97 (F6YB97_HORSE)
Protein
zf-C2H2_12 domain-containing protein
Gene
LOC100062625
Organism
Equus caballus (Horse)
Status
Functioni
GO - Biological processi
- transition between fast and slow fiber Source: Ensembl
Keywordsi
Biological process | Transcription, Transcription regulationARBA annotation |
Names & Taxonomyi
Protein namesi | Recommended name: zf-C2H2_12 domain-containing proteinInterPro annotation |
Gene namesi | Name:LOC100062625Imported |
Organismi | Equus caballus (Horse)Imported |
Taxonomic identifieri | 9796 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Laurasiatheria › Perissodactyla › Equidae › Equus › |
Proteomesi |
|
Subcellular locationi
Keywords - Cellular componenti
NucleusARBA annotationExpressioni
Gene expression databases
Bgeei | ENSECAG00000021592, Expressed in endometrium and 21 other tissues |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 427 – 488 | zf-C2H2_12InterPro annotationAdd BLAST | 62 |
Keywords - Domaini
RepeatARBA annotationPhylogenomic databases
GeneTreei | ENSGT00940000162266 |
HOGENOMi | CLU_310345_0_0_1 |
InParanoidi | F6YB97 |
OMAi | HHCAKVL |
OrthoDBi | 788135at2759 |
TreeFami | TF352524 |
Family and domain databases
Gene3Di | 3.90.1460.10, 2 hits |
InterProi | View protein in InterPro IPR004212, GTF2I IPR036647, GTF2I-like_rpt_sf IPR042224, GTF2IRD2 IPR012337, RNaseH-like_sf IPR040647, SPIN-DOC_Znf-C2H2 |
PANTHERi | PTHR47831, PTHR47831, 1 hit |
Pfami | View protein in Pfam PF02946, GTF2I, 2 hits PF18658, zf-C2H2_12, 1 hit |
SUPFAMi | SSF117773, SSF117773, 2 hits SSF53098, SSF53098, 1 hit |
PROSITEi | View protein in PROSITE PS51139, GTF2I, 2 hits |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All
F6YB97-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MAQVAVSTLS VENESTESRM VVTFLVSALE SMCKELAKSK AEVACIAVYE
60 70 80 90 100
TDVFVVGTDR GRAFVNARAD LQKDFAKYCI AAGLPEVKPP RPANGMPMES
110 120 130 140 150
GETEILRKAV EDYFCLCYGK ALGTTVMVPV PYEKMQRDQA AVRVQGLPEG
160 170 180 190 200
VTFQHPENYD LATLKWILEK KAGISFVINR PFLGPANQLG GPVVVTDAER
210 220 230 240 250
SMTSPSESCG SINVKTEPME DSGISVKAAA VSVKKESDDP NYYRYNMQES
260 270 280 290 300
HHSSGSSEVI EMELPMEDST QLVPPETSED PEAEVKTEGN IISSRLTDSA
310 320 330 340 350
AGVEDLNIVQ VPVPDNEKER LPSIEKIKQL REQVNDLFSR KFGEAIGVDF
360 370 380 390 400
PVKVPYRKIA FNPGCVVIDG MPPGVVFKAP GYLEISSMRR ILDAAEFIKF
410 420 430 440 450
TVLRPLPGLE LSNVGKRKID QEGRVFQEKW ERAYFFVDVQ NIPTCLICKQ
460 470 480 490 500
SMSVSKEYNL RRHYQTNHSK HYDQYTEKMR DEKLHELKKG LRKYLLGSSE
510 520 530 540 550
IVCPEQHQGF ANVSPAEAAA VQPVEDVAGH LWEKLREKIK SFVAYSVAID
560 570 580 590 600
EITDINNTTQ LAIFIRGVDE NFDVSEELLD TVPMTGTKSG NEIFLRVEKS
610 620 630 640 650
LKKFNIDWSK LVSVASTGTP AMVDANDGLV TKLKSKVAMV GKGSDLKSMC
660 670 680 690 700
CILHPESLCA QKLKMDHVMS VVVSSVNWIC SRGVNHSEFT TLLYELDSQY
710 720 730 740 750
GSLLYCTEIK WLSRGLVLKR FFESLEEIDS FMSSRGKPLP QLSSQDWIKD
760 770 780 790 800
LAFLVDMTTH LNTLNISLQG HSQIVTQMYD LIRAFLAKLC LWETHLARNN
810 820 830 840 850
LAHFPTLKSV SRNESDGLNY IPKIVELKTE FQKRLSEFKL YESELTLFSS
860 870 880 890 900
PFSMKIESVP EALQMEVIDL QCNTVLKTKY DKVGIPEFYR YLWSSYPRYK
910 920 930 940
THCAKILSMF GSTYICEQLF SIMKLSKTKF CSQLKDSQWD SVLHITA
Computationally mapped potential isoform sequencesi
There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basketA0A3Q2KSC2 | A0A3Q2KSC2_HORSE | Uncharacterized protein | LOC100062625 | 108 | Annotation score: |
Sequence databases
RefSeqi | XP_001494185.1, XM_001494135.3 |
Genome annotation databases
Ensembli | ENSECAT00000023208; ENSECAP00000019210; ENSECAG00000021592 |
GeneIDi | 100062625 |
KEGGi | ecb:100062625 |
Similar proteinsi
Cross-referencesi
Sequence databases
RefSeqi | XP_001494185.1, XM_001494135.3 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Proteomic databases
PaxDbi | F6YB97 |
Genome annotation databases
Ensembli | ENSECAT00000023208; ENSECAP00000019210; ENSECAG00000021592 |
GeneIDi | 100062625 |
KEGGi | ecb:100062625 |
Phylogenomic databases
GeneTreei | ENSGT00940000162266 |
HOGENOMi | CLU_310345_0_0_1 |
InParanoidi | F6YB97 |
OMAi | HHCAKVL |
OrthoDBi | 788135at2759 |
TreeFami | TF352524 |
Gene expression databases
Bgeei | ENSECAG00000021592, Expressed in endometrium and 21 other tissues |
Family and domain databases
Gene3Di | 3.90.1460.10, 2 hits |
InterProi | View protein in InterPro IPR004212, GTF2I IPR036647, GTF2I-like_rpt_sf IPR042224, GTF2IRD2 IPR012337, RNaseH-like_sf IPR040647, SPIN-DOC_Znf-C2H2 |
PANTHERi | PTHR47831, PTHR47831, 1 hit |
Pfami | View protein in Pfam PF02946, GTF2I, 2 hits PF18658, zf-C2H2_12, 1 hit |
SUPFAMi | SSF117773, SSF117773, 2 hits SSF53098, SSF53098, 1 hit |
PROSITEi | View protein in PROSITE PS51139, GTF2I, 2 hits |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | F6YB97_HORSE | |
Accessioni | F6YB97Primary (citable) accession number: F6YB97 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | July 27, 2011 |
Last sequence update: | December 11, 2019 | |
Last modified: | October 7, 2020 | |
This is version 53 of the entry and version 3 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |