UniProtKB - F6Y9Q7 (F6Y9Q7_HORSE)
Protein
Submitted name:
RAD54 homolog B
Gene
RAD54B
Organism
Equus caballus (Horse)
Status
Functioni
GO - Molecular functioni
- ATP binding Source: UniProtKB-KW
- DNA translocase activity Source: GO_Central
GO - Biological processi
- determination of adult lifespan Source: Ensembl
- double-strand break repair via homologous recombination Source: GO_Central
- reciprocal meiotic recombination Source: GO_Central
- response to drug Source: Ensembl
- response to ionizing radiation Source: Ensembl
Keywordsi
Ligand | ATP-bindingARBA annotation, Nucleotide-binding |
Names & Taxonomyi
Protein namesi | Submitted name: RAD54 homolog BImported |
Gene namesi | Name:RAD54BImported |
Organismi | Equus caballus (Horse)Imported |
Taxonomic identifieri | 9796 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Laurasiatheria › Perissodactyla › Equidae › Equus › |
Proteomesi |
|
Organism-specific databases
VGNCi | VGNC:99695, RAD54B |
Subcellular locationi
Nucleus
- nucleus Source: GO_Central
Expressioni
Gene expression databases
Bgeei | ENSECAG00000021949, Expressed in trophectoderm and 21 other tissues |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 371 – 538 | Helicase ATP-bindingInterPro annotationAdd BLAST | 168 | |
Domaini | 704 – 868 | Helicase C-terminalInterPro annotationAdd BLAST | 165 |
Phylogenomic databases
GeneTreei | ENSGT00940000156966 |
HOGENOMi | CLU_000315_10_1_1 |
Family and domain databases
Gene3Di | 3.40.50.10810, 1 hit |
InterProi | View protein in InterPro IPR014001, Helicase_ATP-bd IPR001650, Helicase_C IPR028002, Myb_DNA-bind_5 IPR027417, P-loop_NTPase IPR038718, SNF2-like_sf IPR000330, SNF2_N |
Pfami | View protein in Pfam PF00271, Helicase_C, 1 hit PF13873, Myb_DNA-bind_5, 1 hit PF00176, SNF2_N, 1 hit |
SMARTi | View protein in SMART SM00487, DEXDc, 1 hit SM00490, HELICc, 1 hit |
SUPFAMi | SSF52540, SSF52540, 2 hits |
PROSITEi | View protein in PROSITE PS51192, HELICASE_ATP_BIND_1, 1 hit PS51194, HELICASE_CTER, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All
F6Y9Q7-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MVGKARSSNF TLSEKLDLLK LVKPYVKILE EHTNKHSVIV EKNRCWDIIA
60 70 80 90 100
VSYNAMGGDR PPRTAQGLRT LYKRLKEYAK QELLQQKETQ SDFKSNISEP
110 120 130 140 150
TKKVMEMIPQ ISSFCLVRDR NHIQSANLDE EAQAGASPLQ VILDHRPVAI
160 170 180 190 200
TVEVKQEEDI HSAPKEITVS KGQEEEPASL VKYFSVVWCK ASKKKHKKWE
210 220 230 240 250
GDAVLIVKGK SFTLKNLEGK DIGRGIGYKF RELEKIEEGQ TMMIGGKEIE
260 270 280 290 300
VMGIISPDDF SSGRCFQLGG KSPAISNFCQ AAKKCFSNPL KSVYKPSSKE
310 320 330 340 350
NRQNSFCNCK PRHDPCAPNS LVMLRPDSRH QWMFNKNCFP LVDVVIDPHL
360 370 380 390 400
VCHLRPHQKE GIRFLYECVM GFRVNDRYGA ILADEMGLGK TIQCISLIWT
410 420 430 440 450
LQCQGPYGGK PVIKKTLIVT PGSLVNNWRK EFQKWLGSER IKIFAVGQDH
460 470 480 490 500
KIEEFTKSPF YSVLIISYEM LLRSLDQVKN IKFDLLICDE GHRLKNSAVK
510 520 530 540 550
TTAALISLSC EKRVILTGTP VQNDLQEFFA LIDFVNPGIL GPLSSYRKIY
560 570 580 590 600
EEPIILSRQP SASEEEKELG ERRAAELTCL TGLFILRRTQ EVINKYLPPK
610 620 630 640 650
IENVVFCQPA ALQIELYRKL LNSRAVRFCL QGLLENSPHL ICIGALKKLC
660 670 680 690 700
NHPCLLFNSI KEKECSSTWD KNEERSLYEG LINVFPADYN PFMFTEEESG
710 720 730 740 750
KLQVLSKLLA VIRELCPAEK VVLVSNYTQT LNILQEVCKR HGYAYTRLDG
760 770 780 790 800
QTPVSQRQQI VDSFNSKYSS DFIFLLSSKA GGVGLNLIGG SHLILYDIDW
810 820 830 840 850
NPATDIQAMS RVWRDGQKHP VHIYRLLTTG TIEEKIYQRQ ISKQDLSGAV
860 870 880 890 900
VDLTKTSEHT QFSVEELKNL FTLHESSHCV THDLLDCECT GGKDHTGDAL
910 920 930 940 950
EKFPISRSCQ LGPHPQKSHS LKPLSMAQLK QWKHFSGDHL SLTDPFLERI
960
RENVSFFFQN ITNQTTAI
Computationally mapped potential isoform sequencesi
There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketA0A3Q2H6A0 | A0A3Q2H6A0_HORSE | RAD54 homolog B | RAD54B | 925 | Annotation score: | ||
F6YA53 | F6YA53_HORSE | RAD54 homolog B | RAD54B | 917 | Annotation score: | ||
A0A3Q2HDV4 | A0A3Q2HDV4_HORSE | RAD54 homolog B | RAD54B | 855 | Annotation score: |
Sequence databases
RefSeqi | XP_014583684.1, XM_014728198.1 |
Genome annotation databases
Ensembli | ENSECAT00000023536; ENSECAP00000019499; ENSECAG00000021949 |
GeneIDi | 100146782 |
KEGGi | ecb:100146782 |
Similar proteinsi
Cross-referencesi
Sequence databases
RefSeqi | XP_014583684.1, XM_014728198.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Genome annotation databases
Ensembli | ENSECAT00000023536; ENSECAP00000019499; ENSECAG00000021949 |
GeneIDi | 100146782 |
KEGGi | ecb:100146782 |
Organism-specific databases
CTDi | 25788 |
VGNCi | VGNC:99695, RAD54B |
Phylogenomic databases
GeneTreei | ENSGT00940000156966 |
HOGENOMi | CLU_000315_10_1_1 |
Gene expression databases
Bgeei | ENSECAG00000021949, Expressed in trophectoderm and 21 other tissues |
Family and domain databases
Gene3Di | 3.40.50.10810, 1 hit |
InterProi | View protein in InterPro IPR014001, Helicase_ATP-bd IPR001650, Helicase_C IPR028002, Myb_DNA-bind_5 IPR027417, P-loop_NTPase IPR038718, SNF2-like_sf IPR000330, SNF2_N |
Pfami | View protein in Pfam PF00271, Helicase_C, 1 hit PF13873, Myb_DNA-bind_5, 1 hit PF00176, SNF2_N, 1 hit |
SMARTi | View protein in SMART SM00487, DEXDc, 1 hit SM00490, HELICc, 1 hit |
SUPFAMi | SSF52540, SSF52540, 2 hits |
PROSITEi | View protein in PROSITE PS51192, HELICASE_ATP_BIND_1, 1 hit PS51194, HELICASE_CTER, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | F6Y9Q7_HORSE | |
Accessioni | F6Y9Q7Primary (citable) accession number: F6Y9Q7 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | July 27, 2011 |
Last sequence update: | April 10, 2019 | |
Last modified: | December 2, 2020 | |
This is version 51 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |