UniProtKB - F6Y1D3 (F6Y1D3_HORSE)
Protein
Submitted name:
Calcium binding and coiled-coil domain 1
Gene
CALCOCO1
Organism
Equus caballus (Horse)
Status
Functioni
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Zinc fingeri | 653 – 679 | UBZ1-typePROSITE-ProRule annotationAdd BLAST | 27 |
GO - Molecular functioni
- armadillo repeat domain binding Source: Ensembl
- beta-catenin binding Source: Ensembl
- chromatin binding Source: Ensembl
- nuclear receptor transcription coactivator activity Source: Ensembl
- protein C-terminus binding Source: Ensembl
- RNA polymerase II cis-regulatory region sequence-specific DNA binding Source: Ensembl
- transcription coactivator activity Source: GO_Central
GO - Biological processi
- intracellular steroid hormone receptor signaling pathway Source: Ensembl
- positive regulation of transcription by RNA polymerase II Source: GO_Central
Keywordsi
Ligand | Metal-binding, Zinc |
Names & Taxonomyi
Protein namesi | Submitted name: Calcium binding and coiled-coil domain 1Imported |
Gene namesi | Name:CALCOCO1Imported |
Organismi | Equus caballus (Horse)Imported |
Taxonomic identifieri | 9796 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Laurasiatheria › Perissodactyla › Equidae › Equus › |
Proteomesi |
|
Organism-specific databases
VGNCi | VGNC:16005, CALCOCO1 |
Subcellular locationi
Cytosol
- cytosol Source: Ensembl
Nucleus
- nuclear chromatin Source: GO_Central
Expressioni
Gene expression databases
Bgeei | ENSECAG00000024023, Expressed in chorionic villus and 22 other tissues |
Interactioni
GO - Molecular functioni
- armadillo repeat domain binding Source: Ensembl
- beta-catenin binding Source: Ensembl
- protein C-terminus binding Source: Ensembl
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 653 – 679 | UBZ1-typeInterPro annotationAdd BLAST | 27 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 514 – 605 | DisorderedSequence analysisAdd BLAST | 92 |
Zinc finger
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Zinc fingeri | 653 – 679 | UBZ1-typePROSITE-ProRule annotationAdd BLAST | 27 |
Keywords - Domaini
Coiled coilSequence analysisARBA annotation, Zinc-fingerPROSITE-ProRule annotationPhylogenomic databases
GeneTreei | ENSGT00950000183025 |
OMAi | SLCEQGQ |
Family and domain databases
InterProi | View protein in InterPro IPR012852, CALCOCO1-like IPR041641, CALCOCO1/2_Zn_UBZ1 IPR041611, SKICH |
Pfami | View protein in Pfam PF07888, CALCOCO1, 1 hit PF17751, SKICH, 1 hit PF18112, Zn-C2H2_12, 1 hit |
PROSITEi | View protein in PROSITE PS51905, ZF_UBZ1, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All
F6Y1D3-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MEESSLSRAP SRGGVNFLNV ARTYIPNTKV ECHYTLPPGT MPSASDWIGI
60 70 80 90 100
FKVEAACVRD YHTFVWSSVP ESATDGAPVH ASVQFQASYL PKPGAQLYQF
110 120 130 140 150
RYVNRQGRVC GQSPPFQFRE PRPMDELVTL EETDGGSDIL LVVPKATVLQ
160 170 180 190 200
NQLDESQQER NDLMQLKLQL EGQVTELRSR VQELETALAT ARQGHADLTE
210 220 230 240 250
QYKGLSRSHG ELTEERDILS RQQGDHVARI LELEDDIQTI SEKVLTKEVE
260 270 280 290 300
LDRVRDTVKA LTREQEKLLG QLKEVQADKE QSEAELQMAQ QENHRLNLEL
310 320 330 340 350
QEAKGRQEEQ SAQAQRLKDK VAQMKETLGQ AQQRVTELEP LKEQLRGAQE
360 370 380 390 400
LAASSQQKAA LLGEELASAA GARDRTMAEL HRSRLEVAGV NGRLAELTLH
410 420 430 440 450
LKEEKSQWSK ERAGLLQSVE AEKDKILKLS AEILRLEKAV QEERTQNQVY
460 470 480 490 500
KTELAREKDS SLVQLSESKR ELTELRSALR VLQKEKEQLQ EEKQELLEYM
510 520 530 540 550
RKLEARLEKV ADEKWNEDAA TEDEEGAAGL SCPAPLTDSE DESPEDMRLP
560 570 580 590 600
PYGLCEHGDP GSSPAGPREA SPLVVISQPA PIAPHLSGPA EDSSSDSEAE
610 620 630 640 650
DEKSVLMAAV QSGGEEANLL LPELGSAFYD MASGFAVGPL SEASTGGPAT
660 670 680 690
PPWKECPICK ERFPAESDKD ALEDHMDGHF FFSTQDPFTF E
Computationally mapped potential isoform sequencesi
There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basketA0A5F5PGW5 | A0A5F5PGW5_HORSE | Calcium binding and coiled-coil dom... | CALCOCO1 | 606 | Annotation score: |
Sequence databases
RefSeqi | XP_001504596.1, XM_001504546.4 |
Genome annotation databases
Ensembli | ENSECAT00000025888; ENSECAP00000021555; ENSECAG00000024023 |
GeneIDi | 100064155 |
KEGGi | ecb:100064155 |
Similar proteinsi
Cross-referencesi
Sequence databases
RefSeqi | XP_001504596.1, XM_001504546.4 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Genome annotation databases
Ensembli | ENSECAT00000025888; ENSECAP00000021555; ENSECAG00000024023 |
GeneIDi | 100064155 |
KEGGi | ecb:100064155 |
Organism-specific databases
CTDi | 57658 |
VGNCi | VGNC:16005, CALCOCO1 |
Phylogenomic databases
GeneTreei | ENSGT00950000183025 |
OMAi | SLCEQGQ |
Gene expression databases
Bgeei | ENSECAG00000024023, Expressed in chorionic villus and 22 other tissues |
Family and domain databases
InterProi | View protein in InterPro IPR012852, CALCOCO1-like IPR041641, CALCOCO1/2_Zn_UBZ1 IPR041611, SKICH |
Pfami | View protein in Pfam PF07888, CALCOCO1, 1 hit PF17751, SKICH, 1 hit PF18112, Zn-C2H2_12, 1 hit |
PROSITEi | View protein in PROSITE PS51905, ZF_UBZ1, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | F6Y1D3_HORSE | |
Accessioni | F6Y1D3Primary (citable) accession number: F6Y1D3 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | July 27, 2011 |
Last sequence update: | April 10, 2019 | |
Last modified: | February 10, 2021 | |
This is version 42 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |