UniProtKB - F6XRV0 (F6XRV0_HORSE)
Protein
Submitted name:
Uncharacterized protein
Gene
CDH23
Organism
Equus caballus (Horse)
Status
Functioni
GO - Molecular functioni
- cadherin binding Source: GO_Central
- calcium ion binding Source: GO_Central
GO - Biological processi
- calcium ion transport Source: Ensembl
- cell-cell adhesion via plasma-membrane adhesion molecules Source: GO_Central
- equilibrioception Source: Ensembl
- homophilic cell adhesion via plasma membrane adhesion molecules Source: InterPro
- inner ear receptor cell stereocilium organization Source: InterPro
- locomotory behavior Source: InterPro
- photoreceptor cell maintenance Source: Ensembl
- regulation of cytosolic calcium ion concentration Source: Ensembl
- sensory perception of light stimulus Source: Ensembl
- sensory perception of sound Source: Ensembl
Keywordsi
Ligand | CalciumPROSITE-ProRule annotationARBA annotation |
Names & Taxonomyi
Protein namesi | Submitted name: Uncharacterized proteinImported |
Gene namesi | Name:CDH23Imported |
Organismi | Equus caballus (Horse)Imported |
Taxonomic identifieri | 9796 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Laurasiatheria › Perissodactyla › Equidae › Equus › |
Proteomesi |
|
Subcellular locationi
Plasma Membrane
- catenin complex Source: GO_Central
Other locations
- integral component of membrane Source: UniProtKB-KW
- stereocilium Source: InterPro
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transmembranei | 3071 – 3094 | HelicalSequence analysisAdd BLAST | 24 |
Keywords - Cellular componenti
Cell membraneARBA annotation, MembranePTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Signal peptidei | 1 – 23 | Sequence analysisAdd BLAST | 23 | |
ChainiPRO_5023815456 | 24 – 3358 | Sequence analysisAdd BLAST | 3335 |
Expressioni
Gene expression databases
Bgeei | ENSECAG00000023411, Expressed in liver and 15 other tissues |
ExpressionAtlasi | F6XRV0, baseline |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 42 – 132 | CadherinInterPro annotationAdd BLAST | 91 | |
Domaini | 133 – 240 | CadherinInterPro annotationAdd BLAST | 108 | |
Domaini | 241 – 352 | CadherinInterPro annotationAdd BLAST | 112 | |
Domaini | 353 – 464 | CadherinInterPro annotationAdd BLAST | 112 | |
Domaini | 465 – 565 | CadherinInterPro annotationAdd BLAST | 101 | |
Domaini | 566 – 675 | CadherinInterPro annotationAdd BLAST | 110 | |
Domaini | 676 – 788 | CadherinInterPro annotationAdd BLAST | 113 | |
Domaini | 783 – 894 | CadherinInterPro annotationAdd BLAST | 112 | |
Domaini | 895 – 999 | CadherinInterPro annotationAdd BLAST | 105 | |
Domaini | 1000 – 1106 | CadherinInterPro annotationAdd BLAST | 107 | |
Domaini | 1107 – 1212 | CadherinInterPro annotationAdd BLAST | 106 | |
Domaini | 1214 – 1317 | CadherinInterPro annotationAdd BLAST | 104 | |
Domaini | 1318 – 1422 | CadherinInterPro annotationAdd BLAST | 105 | |
Domaini | 1424 – 1531 | CadherinInterPro annotationAdd BLAST | 108 | |
Domaini | 1533 – 1638 | CadherinInterPro annotationAdd BLAST | 106 | |
Domaini | 1639 – 1748 | CadherinInterPro annotationAdd BLAST | 110 | |
Domaini | 1763 – 1855 | CadherinInterPro annotationAdd BLAST | 93 | |
Domaini | 1856 – 1963 | CadherinInterPro annotationAdd BLAST | 108 | |
Domaini | 1964 – 2073 | CadherinInterPro annotationAdd BLAST | 110 | |
Domaini | 2074 – 2178 | CadherinInterPro annotationAdd BLAST | 105 | |
Domaini | 2179 – 2297 | CadherinInterPro annotationAdd BLAST | 119 | |
Domaini | 2301 – 2406 | CadherinInterPro annotationAdd BLAST | 106 | |
Domaini | 2407 – 2513 | CadherinInterPro annotationAdd BLAST | 107 | |
Domaini | 2514 – 2615 | CadherinInterPro annotationAdd BLAST | 102 | |
Domaini | 2618 – 2726 | CadherinInterPro annotationAdd BLAST | 109 | |
Domaini | 2733 – 2850 | CadherinInterPro annotationAdd BLAST | 118 | |
Domaini | 2851 – 2979 | CadherinInterPro annotationAdd BLAST | 129 |
Keywords - Domaini
RepeatARBA annotation, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysisPhylogenomic databases
GeneTreei | ENSGT00940000155245 |
Family and domain databases
InterProi | View protein in InterPro IPR002126, Cadherin-like_dom IPR015919, Cadherin-like_sf IPR020894, Cadherin_CS IPR033030, CDH23 |
PANTHERi | PTHR24025:SF18, PTHR24025:SF18, 1 hit |
Pfami | View protein in Pfam PF00028, Cadherin, 24 hits |
PRINTSi | PR00205, CADHERIN |
SMARTi | View protein in SMART SM00112, CA, 26 hits |
SUPFAMi | SSF49313, SSF49313, 27 hits |
PROSITEi | View protein in PROSITE PS00232, CADHERIN_1, 12 hits PS50268, CADHERIN_2, 27 hits |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 5 potential isoforms that are computationally mapped.Show allAlign All
F6XRV0-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MRCHVATGCH VVWLFVLISG SWGQVNRLPF FTNHFFDTYL LISEDTPVGS
60 70 80 90 100
SVTQLLARDM DNDPLVFGVS GEEASRFFAV EPDTGVVWLR QPLDRETKSE
110 120 130 140 150
FTVEFSVSDH QGVITRKVNI QVGDVNDNAP TFHNQPYSVR IPEVGAGNTP
160 170 180 190 200
VGTPIFIVNA TDPDLGAGGS VLYSFQPPSL FFAIDSARGI VTVIRELDYE
210 220 230 240 250
TTQAYQLTVN ATDQDKTRPL STLANLAIII TDIQDMDPIF INLPYSTNIY
260 270 280 290 300
EHSPPGTTVR IITAIDQDKG RPRGIGYTIV SGNTNSIFAL DYISGALTLN
310 320 330 340 350
GLLDRENPLY SHGFILTVKG TELNDDRTPS NATVTTTFNI LVIDINDNAP
360 370 380 390 400
EFNSSEYSVA ITELAQVGFA LPLFIQVVDK DENLGLNSMF EVYLVGNNSH
410 420 430 440 450
HFIISPTSVQ GKADIRIRVA IPLDFETVDR YDFDLFANES VPDHVGYAKV
460 470 480 490 500
KITLINENDN RPIFSQPLYN ISLYENVTVG TSVLTVLATD NDVGTFGEVN
510 520 530 540 550
YFFSDDPDRF SLDKDTGLIM LIARLDYELI QRFTLTVIAR DGGGEETTGR
560 570 580 590 600
VRINVLDVND NAPTFQKDAY VGALRENEPS VTQLVRLRAT DEDSPPNNQI
610 620 630 640 650
TYSIVSASAF GSYFDISVYE GYGVISVSRP LDYEQIPNGL IYLMVMAKDA
660 670 680 690 700
GNPPLNSTVP VTIEVFDEND NPPTFSKPAY FVSVVENIMA GATVLFLNAT
710 720 730 740 750
DLDRSREYGQ ESIIYSLEGS SQFRINARSG EITTTSLLDR ETKSEYILIV
760 770 780 790 800
RAVDGGVGHN QKTGIATVNI TILDINDNHP AWKDAPYYIN LVEMTPPDSD
810 820 830 840 850
VTTVVAVDPD LGENGTLVYS IQPPNKFYSL NSSTGKIRTT HVMLDRENPD
860 870 880 890 900
PHEAELMRKI VVSVTDCGRP PLRATSSATV FVNLLDLNDN DPTFQNLPFV
910 920 930 940 950
AEVLEGTPAG VSIYQVVAID LDEGLNGLVT YRMQVGMPRM DFLINSSSGV
960 970 980 990 1000
VVTTTELDRE RIAEYQLRVV ASDAGTPTKS STSTLTIRVL DVNDETPTFF
1010 1020 1030 1040 1050
PAVYNVSVSE DVPREFRVVW LNCTDNDVGL NAELSYFITG GNVDGKFSVG
1060 1070 1080 1090 1100
YRDAVVRTVV SLDRETTASY TLVLEAIDNG PVGKRRTGTA TVFITVLDVN
1110 1120 1130 1140 1150
DNRPIFLQSS YEASVPEDIP EGHSIVQLKA TDADEGEFGR VWYRILQGNH
1160 1170 1180 1190 1200
GNNFRIHVSS GLLMRGPRSL DRERNSSHVL IVEAYNHDLG PMRSSVRVIV
1210 1220 1230 1240 1250
YVEDVNDEAP VFTQQQYSRL GLRETAGIGT SVIVVRATDR DTGDGGLVNY
1260 1270 1280 1290 1300
RILSGAEGKF EVDESTGLII TVEYLDYETK TSYLMNVSAT DQAPPFNQGF
1310 1320 1330 1340 1350
CSVYVTLLNE LDEAVQFSNA SYEAAILENL ALGTEIVRVQ AYSIDNLNQI
1360 1370 1380 1390 1400
TYRFDAYTSA QAKALFKIDA ITGVITVKGL VDREKGDFYT LTVVADDGGP
1410 1420 1430 1440 1450
KVDSTVKVYI TVLDENDNSP RFDFTSDSAV SVPEDCPVGQ RMATVKARDP
1460 1470 1480 1490 1500
DAGSNGQVVF SLASGNIAGA FEIITTNDST GEVFVARPLD REELDHYILK
1510 1520 1530 1540 1550
VVASDRGTPP RKKDHILQVT ILDVNDNPPV IESPFGYNVS VNENVGGGTA
1560 1570 1580 1590 1600
VVQVRASDRD IGINSILSYY ITKGNEDMTF RMDRISGEIA TRPAPPDRER
1610 1620 1630 1640 1650
QSFYHLVVTV EDEGTPTLSA TTHVYVTIVD ENDNTPVFQQ PHYEILLDEG
1660 1670 1680 1690 1700
PDTINTSLIT IQALDLDEGP NGTVAYAIVT GNIINTFRIN SHSGVISAAK
1710 1720 1730 1740 1750
ELDYEISQGR YTLIVTATDQ CPILSRRLTS TATVLVNVND INDNVPTFPR
1760 1770 1780 1790 1800
DYEGPFDVTE GQPGPRVWTF LAHDRDSGPN GQVEYGILDG DPLGEFVISP
1810 1820 1830 1840 1850
VEGVLRVRKD VELDRETIAF YNLTICARDR GMPPLSSTML VGIRVLDIND
1860 1870 1880 1890 1900
NDPVLLNLPM NITISENSPI SSFVAHVLAS DADSGCNALL TFNITAGNRE
1910 1920 1930 1940 1950
RAFSINATTG IVTVNRPLDR ERIPDYKLTI SVKDNPDNPR IARRDFDLLL
1960 1970 1980 1990 2000
IFLVDENDNQ PLFTESTYQA EVMENSPAGT PLTVLNGPIL ALDADLDVYA
2010 2020 2030 2040 2050
VVTYQLLGSQ SGLFDINNST GMVTVRSGVI IDREAFSPPV LELLLLAEDI
2060 2070 2080 2090 2100
GLLNSTADLL VTILDDNDNF PTFSPATLTV HLLENCPPGF SVLQVTATDE
2110 2120 2130 2140 2150
DSGLNGELIY RIEAGAQDRF LIHPVTGVIR VGNATIDREE QESYRLTVVA
2160 2170 2180 2190 2200
TDRGTVPLSG TAIITILIDD INDSRPEFLN PIQTVSVLES VEPGTVIANV
2210 2220 2230 2240 2250
TAIDRDLDPK LEYRIIGIVA KDDTDRLVPD QEDAFAVNIN TGSVMVKSPL
2260 2270 2280 2290 2300
NRELVATYEV TLSVIDNASD LPERSVSVPN AKLTVNILDV NDNTPQFKPF
2310 2320 2330 2340 2350
GITYYTERIL EGATLGTTLI AVAAVDPDKG LNGLITYTLL DLMPPGYVQL
2360 2370 2380 2390 2400
EDSSAGKVIA NRTVDYEEVH WLNFTVRASD NGSPPRAAEI PVYLEIVDIN
2410 2420 2430 2440 2450
DNNPIFDQPS YQEAVFEDVP VGTVILTVTA TDADSGNFAL VEYSLGDGEG
2460 2470 2480 2490 2500
KFAINPVTGD IYVLSSLDRE KKDHYILTAL AKDNPGDAAS NRRENSVQVV
2510 2520 2530 2540 2550
IQVLDINDCR PQFSKPQFST SVYENEPAGT SVITMMATDQ DEGSNGELAY
2560 2570 2580 2590 2600
SLEGPGVEAF YVDIDSGLVT TKRPLQSYER FNLTVVATDG GQPPLWGTTM
2610 2620 2630 2640 2650
LLVEVIDVND NRPIFVRPPN GTILHIREET PLRSNVYEVY ATDKDEGLNG
2660 2670 2680 2690 2700
AVRYSFLKTA GNRDWEYFTI DPISGLIQTA QRLDREKQAV YSLILVASDL
2710 2720 2730 2740 2750
GQPVPYETMQ PLQVALEDID DNEPLFVRPP KGSPQYQLLT VPEHSPHGTL
2760 2770 2780 2790 2800
VGNVTGAVDA DEGPNAIVYY FIAAGNEEKN FHLHPDGRLL VLRDLDRERE
2810 2820 2830 2840 2850
AVFSFIVKAS SNSSWTPPRG PSPALDLVTD LTLQEVRVVL EDINDQPPRF
2860 2870 2880 2890 2900
TKAEYTAGVA TDAKVGSELI QVLALDADIG NNSLVFYSIL AIHYFRALAN
2910 2920 2930 2940 2950
DSEDMGQVFT MGSMDGILRT FDLFMAYSPG YFVVDIVARD LAGHNDTAVI
2960 2970 2980 2990 3000
GIYILRDDQR VKIVINEIPD RVRDFEEEFI RLLSNITGAI VNTDDVQFHV
3010 3020 3030 3040 3050
DKKGRVNFAQ TELLIHVVNR ETNRILDVDR VIQMIDENKE QLRNLFRNYN
3060 3070 3080 3090 3100
VLDVQPAISV RLPDDMSALQ MAIIVLAILL FLAAMLFILM NWYYRTIHKR
3110 3120 3130 3140 3150
KLKAIVAGSA GNRGFIDIMD MPNTNKYSFD GANPVWLDPF CRNLELAAQA
3160 3170 3180 3190 3200
EHEDDLPENL SEIADLWNSP TRTHGTFGRE PAAVKPDDDR YLRAAIQEYD
3210 3220 3230 3240 3250
NIAKLGQIIR EGPIKGSLLK VVLEDYLRLK KLFAQRMVQK AASCHSSISE
3260 3270 3280 3290 3300
LIPTELEEEP GECSPGQGSL RFCHKPPTEL KGPDGIHMVH GSTGTLLATD
3310 3320 3330 3340 3350
LNSLPEDDQK GLGRSLETLT AAEASAFERN ARTESAKSTP LHKLRDVIME
SPLEITEL
Computationally mapped potential isoform sequencesi
There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketF6XLQ0 | F6XLQ0_HORSE | Uncharacterized protein | CDH23 | 3,353 | Annotation score: | ||
F6XLL6 | F6XLL6_HORSE | Uncharacterized protein | CDH23 | 1,079 | Annotation score: | ||
A0A3Q2GRP0 | A0A3Q2GRP0_HORSE | Uncharacterized protein | CDH23 | 1,380 | Annotation score: | ||
A0A3Q2HCH9 | A0A3Q2HCH9_HORSE | Uncharacterized protein | CDH23 | 1,048 | Annotation score: | ||
A0A3Q2HD56 | A0A3Q2HD56_HORSE | Uncharacterized protein | CDH23 | 525 | Annotation score: |
Genome annotation databases
Ensembli | ENSECAT00000026167; ENSECAP00000021808; ENSECAG00000023411 |
Similar proteinsi
Cross-referencesi
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Genome annotation databases
Ensembli | ENSECAT00000026167; ENSECAP00000021808; ENSECAG00000023411 |
Phylogenomic databases
GeneTreei | ENSGT00940000155245 |
Gene expression databases
Bgeei | ENSECAG00000023411, Expressed in liver and 15 other tissues |
ExpressionAtlasi | F6XRV0, baseline |
Family and domain databases
InterProi | View protein in InterPro IPR002126, Cadherin-like_dom IPR015919, Cadherin-like_sf IPR020894, Cadherin_CS IPR033030, CDH23 |
PANTHERi | PTHR24025:SF18, PTHR24025:SF18, 1 hit |
Pfami | View protein in Pfam PF00028, Cadherin, 24 hits |
PRINTSi | PR00205, CADHERIN |
SMARTi | View protein in SMART SM00112, CA, 26 hits |
SUPFAMi | SSF49313, SSF49313, 27 hits |
PROSITEi | View protein in PROSITE PS00232, CADHERIN_1, 12 hits PS50268, CADHERIN_2, 27 hits |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | F6XRV0_HORSE | |
Accessioni | F6XRV0Primary (citable) accession number: F6XRV0 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | July 27, 2011 |
Last sequence update: | December 11, 2019 | |
Last modified: | December 2, 2020 | |
This is version 53 of the entry and version 3 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |