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Protein
Submitted name:

Uncharacterized protein

Gene

RBM45

Organism
Monodelphis domestica (Gray short-tailed opossum)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:RBM45Imported
OrganismiMonodelphis domestica (Gray short-tailed opossum)Imported
Taxonomic identifieri13616 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaMetatheriaDidelphimorphiaDidelphidaeMonodelphis
Proteomesi
  • UP000002280 Componenti: Chromosome 4

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSMODG00000009742 Expressed in 7 organ(s), highest expression level in female gonad

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini26 – 106RRMInterPro annotationAdd BLAST81
Domaini121 – 195RRMInterPro annotationAdd BLAST75
Domaini392 – 464RRMInterPro annotationAdd BLAST73

Phylogenomic databases

eggNOGiENOG410IEKU Eukaryota
ENOG410XP9Z LUCA
GeneTreeiENSGT00680000100059
InParanoidiF6X9L0
OMAiGEIQDIW
OrthoDBiEOG091G0L6Q
TreeFamiTF324216

Family and domain databases

CDDicd12366 RRM1_RBM45, 1 hit
cd12367 RRM2_RBM45, 1 hit
cd12368 RRM3_RBM45, 1 hit
cd12369 RRM4_RBM45, 1 hit
Gene3Di3.30.70.330, 3 hits
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR034203 RBM45_RRM1
IPR034206 RBM45_RRM2
IPR034207 RBM45_RRM3
IPR034208 RBM45_RRM4
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 4 hits
SMARTiView protein in SMART
SM00360 RRM, 4 hits
SUPFAMiSSF54928 SSF54928, 2 hits
PROSITEiView protein in PROSITE
PS50102 RRM, 3 hits

Sequencei

Sequence statusi: Complete.

F6X9L0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDEASSCGSG GGFRPGVDSL DEPPNSRIFL VISKYTPESV LRERFSPFGE
60 70 80 90 100
IQDIWVVRDK HTKESKGIAF VKFARSSQAC RAMEEMHGQC LSPSDSKPIK
110 120 130 140 150
VFIAQARSSG SHRDVEDEEL TRIFVMIPKS YTEEDLRDKF KVYGDIEYCS
160 170 180 190 200
IIKNKATGES RGLGYVRYLK PSQAAQAIEN CDRSFRAILA EPKNKASESS
210 220 230 240 250
EQDYYSSMRQ EALGHEHRVN MFPFEQPEFP SFEKNDIRGQ ETISKRLSVV
260 270 280 290 300
SRVPFTQEQL YSIFDIVPGL EYCEVQRDPY SNYGHGVVQY FNVASAIYAK
310 320 330 340 350
YKLHGFQYPP GNRIGVSFLD DGSNGTDLLR KMATQMVAAQ LASMVWNNPG
360 370 380 390 400
QQQFLASLQF GGSSGSQLPQ IQTDIVLPSC KKKAPPETAV KERLFIVFNP
410 420 430 440 450
HPLPLDILED IFCRFGNLIE VYLVSGKNVG YAKYADRTSA NDAIATLHGK
460 470
ILNGVRLKVM LADSPREESN KRQRTY
Length:476
Mass (Da):53,567
Last modified:January 9, 2013 - v2
Checksum:i6B757FAC92E70793
GO

Sequence databases

RefSeqiXP_007494493.1, XM_007494431.2

Genome annotation databases

EnsembliENSMODT00000012397; ENSMODP00000012172; ENSMODG00000009742
GeneIDi100019568

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_007494493.1, XM_007494431.2

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMODT00000012397; ENSMODP00000012172; ENSMODG00000009742
GeneIDi100019568

Organism-specific databases

CTDi129831

Phylogenomic databases

eggNOGiENOG410IEKU Eukaryota
ENOG410XP9Z LUCA
GeneTreeiENSGT00680000100059
InParanoidiF6X9L0
OMAiGEIQDIW
OrthoDBiEOG091G0L6Q
TreeFamiTF324216

Gene expression databases

BgeeiENSMODG00000009742 Expressed in 7 organ(s), highest expression level in female gonad

Family and domain databases

CDDicd12366 RRM1_RBM45, 1 hit
cd12367 RRM2_RBM45, 1 hit
cd12368 RRM3_RBM45, 1 hit
cd12369 RRM4_RBM45, 1 hit
Gene3Di3.30.70.330, 3 hits
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR034203 RBM45_RRM1
IPR034206 RBM45_RRM2
IPR034207 RBM45_RRM3
IPR034208 RBM45_RRM4
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 4 hits
SMARTiView protein in SMART
SM00360 RRM, 4 hits
SUPFAMiSSF54928 SSF54928, 2 hits
PROSITEiView protein in PROSITE
PS50102 RRM, 3 hits
ProtoNetiSearch...

Entry informationi

Entry nameiF6X9L0_MONDO
AccessioniPrimary (citable) accession number: F6X9L0
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: January 9, 2013
Last modified: November 7, 2018
This is version 44 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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