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Protein
Submitted name:

HLA class II histocompatibility antigen, DO alpha chain

Gene

HLA-DOA

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
HLA class II histocompatibility antigen, DO alpha chainImported
Gene namesi
Name:HLA-DOAImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 6

Organism-specific databases

EuPathDBiHostDB:ENSG00000204252.12
HGNCiHGNC:4936 HLA-DOA

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000204252

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 25Sequence analysisAdd BLAST25
ChainiPRO_500334557326 – 86Sequence analysisAdd BLAST61

Proteomic databases

PRIDEiF6WU08

Expressioni

Gene expression databases

BgeeiENSG00000204252 Expressed in 192 organ(s), highest expression level in amniotic fluid
ExpressionAtlasiF6WU08 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliF6WU08
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410IM01 Eukaryota
ENOG4111C4S LUCA
GeneTreeiENSGT00900000140882

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 7 potential isoforms that are computationally mapped.Show allAlign All

F6WU08-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MALRAGLVLG FHTLMTLLSP QEAGATKGRA GRHRRNQSPS GHPGGALQPQ
60 70 80
QSHQRASTGD RAPQVSGGAG PAQHPHLHRG QHLPPC
Length:86
Mass (Da):8,987
Last modified:February 22, 2012 - v1
Checksum:iA024839BC3EA377E
GO

Computationally mapped potential isoform sequencesi

There are 7 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
P06340DOA_HUMAN
HLA class II histocompatibility ant...
HLA-DOA HLA-DNA, HLA-DZA
250Annotation score:
A0A140T9P4A0A140T9P4_HUMAN
HLA class II histocompatibility ant...
HLA-DOA
86Annotation score:
A0A140T8X4A0A140T8X4_HUMAN
HLA class II histocompatibility ant...
HLA-DOA
86Annotation score:
A0A140T9J7A0A140T9J7_HUMAN
HLA class II histocompatibility ant...
HLA-DOA
86Annotation score:
A0A140T9G1A0A140T9G1_HUMAN
HLA class II histocompatibility ant...
HLA-DOA
86Annotation score:
A0A140T9F9A0A140T9F9_HUMAN
HLA class II histocompatibility ant...
HLA-DOA
86Annotation score:
A0A140T9G3A0A140T9G3_HUMAN
HLA class II histocompatibility ant...
HLA-DOA
86Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei86Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL645931 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000374813; ENSP00000363946; ENSG00000204252
UCSCiuc063nts.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL645931 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliF6WU08
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiF6WU08

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000374813; ENSP00000363946; ENSG00000204252
UCSCiuc063nts.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000204252.12
HGNCiHGNC:4936 HLA-DOA
OpenTargetsiENSG00000204252
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410IM01 Eukaryota
ENOG4111C4S LUCA
GeneTreeiENSGT00900000140882

Miscellaneous databases

ChiTaRSiHLA-DOA human

Gene expression databases

BgeeiENSG00000204252 Expressed in 192 organ(s), highest expression level in amniotic fluid
ExpressionAtlasiF6WU08 baseline and differential

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiF6WU08_HUMAN
AccessioniPrimary (citable) accession number: F6WU08
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: September 12, 2018
This is version 31 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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