Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

RNA-binding protein Raly isoform 1

Gene

RALY

Organism
Callithrix jacchus (White-tufted-ear marmoset)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
RNA-binding protein Raly isoform 1Imported
Gene namesi
Name:RALYImported
OrganismiCallithrix jacchus (White-tufted-ear marmoset)Imported
Taxonomic identifieri9483 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniPlatyrrhiniCebidaeCallitrichinaeCallithrixCallithrix
Proteomesi
  • UP000008225 Componenti: Unplaced

Interactioni

Protein-protein interaction databases

STRINGi9483.ENSCJAP00000042753

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 92RRMInterPro annotationAdd BLAST72

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili187 – 214Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0118 Eukaryota
COG0724 LUCA
GeneTreeiENSGT00390000006718
KOiK12895
OMAiXLFDYRG
OrthoDBiEOG091G0O1Q
TreeFamiTF330974

Family and domain databases

CDDicd12604 RRM_RALY, 1 hit
Gene3Di3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR017347 hnRNP_C
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR034502 RALY_RRM
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 1 hit
PIRSFiPIRSF037992 hnRNP-C_Raly, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 1 hit
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 1 hit

Sequencei

Sequence statusi: Complete.

F6V468-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLKIQASNV TNKNDPKSIN SRVFIGNLNT ALVKKSDVET IFSKYGRVAG
60 70 80 90 100
CSVHKGYAFV QYSNERHARA AVLGENGRVL AGQTLDINMA GEPKPDRPKG
110 120 130 140 150
LKRAASAIYS GYIFDYDYYR DDFYDRLFDY RGRLSPVPVP RAVPVKRPRV
160 170 180 190 200
TVPLVRRVKT NIPVKLFARS TAITTSSAKI KLKSSELQAI KTELTQIKSN
210 220 230 240 250
IDALLSRLEQ IAAEQKANPD GKKKGDGGGG GGGGSGGSGG GGGGGGGGGG
260 270 280 290 300
GGSGSSRPPV PQENTTSEAG LPQGEARTRD DGDEEGLLTH SEEELEHSQD

TDADDGALQ
Length:309
Mass (Da):32,706
Last modified:July 27, 2011 - v1
Checksum:i6E826B92E598B578
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ACFV01105807 Genomic DNA No translation available.
ACFV01105808 Genomic DNA No translation available.
ACFV01105809 Genomic DNA No translation available.
ACFV01105810 Genomic DNA No translation available.
ACFV01105811 Genomic DNA No translation available.
ACFV01105812 Genomic DNA No translation available.
ACFV01105813 Genomic DNA No translation available.
GAMT01001844 mRNA Translation: JAB10017.1
GAMR01003301 mRNA Translation: JAB30631.1
GAMP01001070 mRNA Translation: JAB51685.1
RefSeqiXP_002747313.1, XM_002747267.3
XP_008993756.1, XM_008995508.2
XP_008993757.1, XM_008995509.2

Genome annotation databases

EnsembliENSCJAT00000054323; ENSCJAP00000042753; ENSCJAG00000018361
GeneIDi100401730
KEGGicjc:100401730

Similar proteinsi

Entry informationi

Entry nameiF6V468_CALJA
AccessioniPrimary (citable) accession number: F6V468
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: June 20, 2018
This is version 44 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health