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Protein
Submitted name:

Sonic hedgehog

Gene

SHH

Organism
Equus caballus (Horse)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Protein family/group databases

MEROPSiC46.002

Names & Taxonomyi

Protein namesi
Submitted name:
Sonic hedgehogImported
Gene namesi
Name:SHHImported
OrganismiEquus caballus (Horse)Imported
Taxonomic identifieri9796 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaPerissodactylaEquidaeEquus
Proteomesi
  • UP000002281 Componenti: Chromosome 4

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_500334255124 – 328Sequence analysisAdd BLAST305

Proteomic databases

PaxDbiF6TJJ6

Expressioni

Gene expression databases

BgeeiENSECAG00000023075

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9796.ENSECAP00000020524

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini196 – 304HintNInterPro annotationAdd BLAST109

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG3638 Eukaryota
ENOG410XQA3 LUCA
GeneTreeiENSGT00390000001117
InParanoidiF6TJJ6
OMAiEHSWAHR
OrthoDBiEOG091G0N90
TreeFamiTF106458

Family and domain databases

Gene3Di3.30.1380.10, 1 hit
InterProiView protein in InterPro
IPR001657 Hedgehog
IPR009045 Hedgehog_sig/DD-Pept_Zn-bd_sf
IPR000320 Hedgehog_signalling_dom
IPR001767 Hint_dom
IPR003587 Hint_dom_N
IPR036844 Hint_dom_sf
IPR006141 Intein_N
PfamiView protein in Pfam
PF01085 HH_signal, 1 hit
PF01079 Hint, 1 hit
PRINTSiPR00632 SONICHHOG
SMARTiView protein in SMART
SM00306 HintN, 1 hit
SUPFAMiSSF51294 SSF51294, 1 hit
SSF55166 SSF55166, 1 hit
PROSITEiView protein in PROSITE
PS50817 INTEIN_N_TER, 1 hit

Sequencei

Sequence statusi: Complete.

F6TJJ6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLLLARCLLV VLVSSLLMCS GLACGPGRGF GKRRHPKKLT PLAYKQFIPN
60 70 80 90 100
VAEKTLGASG RYEGKISRNS ERFKELTPNY NPDIIFKDEE NTGADRLMTQ
110 120 130 140 150
RCKDKLNALA ISVMNQWPGV KLRVTEGWDE DGHHSEESLH YEGRAVDITT
160 170 180 190 200
SDRDRSKYGM LARLAVEAGF DWVYYESKAH IHCSVKAENS VAAKSGGCFP
210 220 230 240 250
GSATVHLERG GTKLVKDLRP GDRVLAADDQ GRLLYSDFLT FLDRDDGAKK
260 270 280 290 300
VFYVIETREP RERLLLTAAH LLFVAPHNDS AAGEPGAPWS AGRVRPGQRV
310 320
YVVAERGGDR RLLPAAVHSV TLREEATG
Length:328
Mass (Da):36,275
Last modified:July 27, 2011 - v1
Checksum:iFD148E4F86817191
GO

Genome annotation databases

EnsembliENSECAT00000024693; ENSECAP00000020524; ENSECAG00000023075

Similar proteinsi

Entry informationi

Entry nameiF6TJJ6_HORSE
AccessioniPrimary (citable) accession number: F6TJJ6
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: July 18, 2018
This is version 50 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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