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Protein
Submitted name:

Integrin subunit beta like 1

Gene

ITGBL1

Organism
Equus caballus (Horse)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

  • integrin binding Source: GO_Central

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Integrin subunit beta like 1Imported
Gene namesi
Name:ITGBL1Imported
OrganismiEquus caballus (Horse)Imported
Taxonomic identifieri9796 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaPerissodactylaEquidaeEquus
Proteomesi
  • UP000002281 Componenti: Chromosome 17

Organism-specific databases

VGNCiVGNC:19183 ITGBL1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_500334179624 – 494Sequence analysisAdd BLAST471

Proteomic databases

PaxDbiF6SSR0

Expressioni

Gene expression databases

BgeeiENSECAG00000018067 Expressed in 3 organ(s), highest expression level in prefrontal cortex

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9796.ENSECAP00000015809

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini90 – 127EGF-likeInterPro annotationAdd BLAST38
Domaini142 – 179EGF-likeInterPro annotationAdd BLAST38
Domaini184 – 217EGF-likeInterPro annotationAdd BLAST34
Domaini230 – 270EGF-likeInterPro annotationAdd BLAST41
Domaini275 – 311EGF-likeInterPro annotationAdd BLAST37
Domaini367 – 399EGF-likeInterPro annotationAdd BLAST33

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG1226 Eukaryota
ENOG410XP60 LUCA
GeneTreeiENSGT00760000119064
InParanoidiF6SSR0
OMAiCQYPTHC
OrthoDBiEOG091G05SQ
TreeFamiTF332636

Family and domain databases

InterProiView protein in InterPro
IPR000742 EGF-like_dom
IPR013111 EGF_extracell
IPR027070 Integrin_b-like_p1
IPR015812 Integrin_bsu
PANTHERiPTHR10082 PTHR10082, 1 hit
PTHR10082:SF3 PTHR10082:SF3, 1 hit
PfamiView protein in Pfam
PF07974 EGF_2, 4 hits
SMARTiView protein in SMART
SM00181 EGF, 6 hits
PROSITEiView protein in PROSITE
PS00243 INTEGRIN_BETA, 5 hits

Sequencei

Sequence statusi: Complete.

F6SSR0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MLPAGFRNVL LLASSLLFAG LSAVPQSFSP SLRIGPGAAC RLSRAESERR
60 70 80 90 100
CRAPGQPPGG ALCHGRGRCD CGVCICHVSE PGVYFGPLCE CHEWVCETYD
110 120 130 140 150
GSTCAGHGKC NCGKCECDEG WSGDACQYPT HCDLTKKKSN QMCKNSQDVI
160 170 180 190 200
CSNAGTCHCG RCKCDNSDGN GLVYGKFCEC DDRECIDDET EEICGGHGKC
210 220 230 240 250
YCGNCYCEAG WHGDKCEFQC DITPWESKRR CTSPDGKICS NRGICVCGEC
260 270 280 290 300
SCHDVDPTGD WGDIHGDTCE CDERDCRAVY DRYSDDFCSG HGQCNCGRCD
310 320 330 340 350
CKVGWYGKKC EHPNSCPLSA EESIKKCQGS SDLPCSGRGK CECGKCTCYP
360 370 380 390 400
PGDRRVYGRT CECDNRRCED LDGVICGGHG TCSCGRCVCE KGWFGKLCQH
410 420 430 440 450
PRKCNMTEEQ SKSLCESADG ILCSGKGSCH CGKCICSAEE WYISGEFCDC
460 470 480 490
DDRDCDKHDG LICTGNGICS CGNCECWDGW NGNACEIWLG TEYP
Length:494
Mass (Da):53,599
Last modified:July 27, 2011 - v1
Checksum:iB78AF00EF1714888
GO

Sequence databases

RefSeqiXP_003363266.1, XM_003363218.3

Genome annotation databases

EnsembliENSECAT00000019322; ENSECAP00000015809; ENSECAG00000018067
GeneIDi100062835
KEGGiecb:100062835

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_003363266.1, XM_003363218.3

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9796.ENSECAP00000015809

Proteomic databases

PaxDbiF6SSR0

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSECAT00000019322; ENSECAP00000015809; ENSECAG00000018067
GeneIDi100062835
KEGGiecb:100062835

Organism-specific databases

CTDi9358
VGNCiVGNC:19183 ITGBL1

Phylogenomic databases

eggNOGiKOG1226 Eukaryota
ENOG410XP60 LUCA
GeneTreeiENSGT00760000119064
InParanoidiF6SSR0
OMAiCQYPTHC
OrthoDBiEOG091G05SQ
TreeFamiTF332636

Gene expression databases

BgeeiENSECAG00000018067 Expressed in 3 organ(s), highest expression level in prefrontal cortex

Family and domain databases

InterProiView protein in InterPro
IPR000742 EGF-like_dom
IPR013111 EGF_extracell
IPR027070 Integrin_b-like_p1
IPR015812 Integrin_bsu
PANTHERiPTHR10082 PTHR10082, 1 hit
PTHR10082:SF3 PTHR10082:SF3, 1 hit
PfamiView protein in Pfam
PF07974 EGF_2, 4 hits
SMARTiView protein in SMART
SM00181 EGF, 6 hits
PROSITEiView protein in PROSITE
PS00243 INTEGRIN_BETA, 5 hits
ProtoNetiSearch...

Entry informationi

Entry nameiF6SSR0_HORSE
AccessioniPrimary (citable) accession number: F6SSR0
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: November 7, 2018
This is version 45 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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