UniProtKB - F6SRW8 (F6SRW8_HUMAN)

BLAST

>tr|F6SRW8|F6SRW8_HUMAN Intraflagellar transport protein 88 homolog (Fragment) OS=Homo sapiens OX=9606 GN=IFT88 PE=4 SV=1
MMQNVHLAPETDEDDLYSGYNDYNPIYDIEELENDAAFQQAVRTSHGRRP

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History
Entry version 42 (12 Sep 2018)
Sequence version 1 (27 Jul 2011)
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Protein

Submitted name:

Intraflagellar transport protein 88 homolog

Gene

IFT88

Organism

Homo sapiens (Human)

Status

Unreviewed-Annotation score: -Protein predictedⁱ

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: Intraflagellar transport protein 88 homologImported
Gene namesⁱ	Name:IFT88Imported
Organismⁱ	Homo sapiens (Human)Imported
Taxonomic identifierⁱ	9606 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Dipnotetrapodomorpha › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Boreoeutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo
Proteomesⁱ	UP000005640 Componentⁱ: Chromosome 13

Organism-specific databases

EuPathDBⁱ	HostDB:ENSG00000032742.17
Human Gene Nomenclature Database More...HGNCⁱ	HGNC:20606 IFT88

Pathology & Biotechⁱ

Organism-specific databases

Open Targets More...OpenTargetsⁱ	ENSG00000032742

OpenTargetsⁱ

ENSG00000032742

Expressionⁱ

Gene expression databases

Bgeeⁱ	ENSG00000032742 Expressed in 218 organ(s), highest expression level in testis
ExpressionAtlasⁱ	F6SRW8 baseline and differential

Structureⁱ

3D structure databases

ProteinModelPortalⁱ	F6SRW8
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Family & Domainsⁱ

Phylogenomic databases

eggNOGⁱ	KOG2003 Eukaryota ENOG410XPPW LUCA
Ensembl GeneTree More...GeneTreeⁱ	ENSGT00390000015473

Sequence (1+)ⁱ

Sequence statusⁱ: Fragment.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show all Align All

F6SRW8-1 [UniParc]FASTA Add to basket

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        10         20         30         40         50
MMQNVHLAPE TDEDDLYSGY NDYNPIYDIE ELENDAAFQQ AVRTSHGRRP

Length:50

Mass (Da):5,830

Last modified:July 27, 2011 - v1

Checksum:ⁱEE551737341FD4A6

Computationally mapped potential isoform sequencesⁱ

There are 2 potential isoforms mapped to this entry.BLAST Align Show all Add to basket

Entry	Entry name	Protein names	Gene names	Length	Annotation

Q13099	IFT88_HUMAN	Intraflagellar transport protein 88... Intraflagellar transport protein 88 homolog (Recessive polycystic kidney disease protein Tg737 homolog) (Tetratricopeptide repeat protein 10, TPR repeat protein 10)	IFT88 TG737, TTC10	833	Annotation score:
F5H6C2	F5H6C2_HUMAN	Intraflagellar transport protein 88... Intraflagellar transport protein 88 homolog	IFT88	368	Annotation score:

Experimental Info

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Non-terminal residueⁱ	50	Imported		1

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AL161772 Genomic DNA No translation available. AL590096 Genomic DNA No translation available.

Select the link destinations:
EMBLⁱ
GenBankⁱ
DDBJⁱ

Links Updated

AL161772 Genomic DNA No translation available.
AL590096 Genomic DNA No translation available.

Genome annotation databases

Ensemblⁱ	ENST00000389373; ENSP00000374024; ENSG00000032742
UCSC genome browser More...UCSCⁱ	uc058vud.1 human

Protein	Similar proteins		Species	Score	Length	Source
F6SRW8	IFT88 isoform 2		PONAB		833	UniRef100_A0A2J8RJI1
IFT88 isoform 3 (Fragment)		PANTR		50
IFT88 isoform 1		PONAB		824
IFT88 isoform 3 (Fragment)		PONAB		50
UPI000CEF7163		PONAB		869
+1

Protein	Similar proteins		Species	Score	Length	Source
F6SRW8	Intraflagellar transport protein 88 homolog		HUMAN		833	UniRef90_Q13099
IFT88 isoform 2		PONAB		833
IFT88 isoform 3 (Fragment)		PANTR		50
Uncharacterized protein		PANPA		833
Uncharacterized protein		NOMLE		832
+87

Protein	Similar proteins		Species	Score	Length	Source
F6SRW8	Intraflagellar transport protein 88 homolog		MOUSE		824	UniRef50_Q61371
Intraflagellar transport protein 88 homolog		HUMAN		833
Intraflagellar transport protein 88 like protein		MYOBR		958
Uncharacterized protein		MYOLU		839
Intraflagellar transport 88		SHEEP		834
+951

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AL161772 Genomic DNA No translation available. AL590096 Genomic DNA No translation available.

Select the link destinations:
EMBLⁱ
GenBankⁱ
DDBJⁱ

Links Updated

AL161772 Genomic DNA No translation available.
AL590096 Genomic DNA No translation available.

3D structure databases

ProteinModelPortalⁱ	F6SRW8
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

Ensemblⁱ	ENST00000389373; ENSP00000374024; ENSG00000032742
UCSCⁱ	uc058vud.1 human

Organism-specific databases

EuPathDBⁱ	HostDB:ENSG00000032742.17
HGNCⁱ	HGNC:20606 IFT88
OpenTargetsⁱ	ENSG00000032742
GenAtlas: human gene database More...GenAtlasⁱ	Search...

Phylogenomic databases

eggNOGⁱ	KOG2003 Eukaryota ENOG410XPPW LUCA
GeneTreeⁱ	ENSGT00390000015473

Miscellaneous databases

ChiTaRSⁱ	IFT88 human

ChiTaRSⁱ

IFT88 human

Gene expression databases

Bgeeⁱ	ENSG00000032742 Expressed in 218 organ(s), highest expression level in testis
ExpressionAtlasⁱ	F6SRW8 baseline and differential

Family and domain databases

ProtoNetⁱ	Search...

ProtoNetⁱ

Search...

Entry informationⁱ

Entry nameⁱ	F6SRW8_HUMAN
Accessionⁱ	F6SRW8Primary (citable) accession number: F6SRW8 Secondary accession number(s): F8W6Z5
Entry historyⁱ	Integrated into UniProtKB/TrEMBL:	July 27, 2011
	Last sequence update:	July 27, 2011
	Last modified:	September 12, 2018
	This is version 42 of the entry and version 1 of the sequence. See complete history.
Entry statusⁱ	Unreviewed (UniProtKB/TrEMBL)
Disclaimer	Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousⁱ

Keywords - Technical termⁱ

Complete proteome, Reference proteomeImported

UniProtKB - F6SRW8 (F6SRW8_HUMAN)

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Intraflagellar transport protein 88 homolog

IFT88

Select a section on the left to see content.

Names & Taxonomyⁱ

Organism-specific databases

Pathology & Biotechⁱ

Organism-specific databases

Expressionⁱ

Gene expression databases

Structureⁱ

3D structure databases

Family & Domainsⁱ

Phylogenomic databases

Sequence (1+)ⁱ

Computationally mapped potential isoform sequencesⁱ

Experimental Info

Sequence databases

Genome annotation databases

Similar proteinsⁱ

Cross-referencesⁱ

Sequence databases

3D structure databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Miscellaneous databases

Gene expression databases

Family and domain databases

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ

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UniProtKB - F6SRW8 (F6SRW8_HUMAN)

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Intraflagellar transport protein 88 homolog

IFT88

Select a section on the left to see content.

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

Organism-specific databases

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Phylogenomic databases

Experimental Info

Sequence databases

Genome annotation databases

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Miscellaneous databases

Gene expression databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

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Names & Taxonomyⁱ

Pathology & Biotechⁱ

Expressionⁱ

Structureⁱ

Family & Domainsⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ