UniProtKB - F6SR70 (F6SR70_HORSE)
Protein
Submitted name:
Uncharacterized protein
Gene
FMC1-LUC7L2
Organism
Equus caballus (Horse)
Status
Functioni
GO - Molecular functioni
- mRNA binding Source: GO_Central
GO - Biological processi
- mRNA splice site selection Source: GO_Central
Names & Taxonomyi
Protein namesi | Submitted name: Uncharacterized proteinImported |
Gene namesi | Name:FMC1-LUC7L2Imported |
Organismi | Equus caballus (Horse)Imported |
Taxonomic identifieri | 9796 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Laurasiatheria › Perissodactyla › Equidae › Equus › |
Proteomesi |
|
Subcellular locationi
Nucleus
- U1 snRNP Source: GO_Central
- U2-type prespliceosome Source: GO_Central
Expressioni
Gene expression databases
Bgeei | ENSECAG00000024679, Expressed in bone marrow and 23 other tissues |
Family & Domainsi
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 232 – 389 | DisorderedSequence analysisAdd BLAST | 158 |
Coiled coil
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Coiled coili | 91 – 143 | Sequence analysisAdd BLAST | 53 | |
Coiled coili | 146 – 169 | Sequence analysisAdd BLAST | 24 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 232 – 258 | PolyampholyteSequence analysisAdd BLAST | 27 | |
Compositional biasi | 259 – 314 | BasicSequence analysisAdd BLAST | 56 | |
Compositional biasi | 315 – 389 | PolyampholyteSequence analysisAdd BLAST | 75 |
Sequence similaritiesi
Belongs to the Luc7 family.ARBA annotation
Keywords - Domaini
Coiled coilSequence analysisPhylogenomic databases
GeneTreei | ENSGT00950000183213 |
HOGENOMi | CLU_030397_3_0_1 |
InParanoidi | F6SR70 |
TreeFami | TF317607 |
Family and domain databases
InterProi | View protein in InterPro IPR004882, Luc7-rel |
PANTHERi | PTHR12375, PTHR12375, 1 hit |
Pfami | View protein in Pfam PF03194, LUC7, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All
F6SR70-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MVIHSQLKKI QGASERMGDT TRQRIKFSDD RVCKSHLLNC CPHDVLSGTR
60 70 80 90 100
MDLGECLKVH DLALRADYEI ASKEQDFFFE LDAMDHLQSF IADCDRRTEV
110 120 130 140 150
AKKRLAETQE EISAEVAAKA ERVHELNEEI GKLLAKVEQL GAEGNVEESQ
160 170 180 190 200
KVMDEVEKAR AKKREAEEVY RNSMPASSFQ QQKLRVCEVC SAYLGLHDND
210 220 230 240 250
RRLADHFGGK LHLGFIEIRE KLEELKRVVA EKQEKRNQER LKRREERERE
260 270 280 290 300
EREKLRRSRS HSKNPKRSRS REHRRHRSRS MSRERKRRTR SKSREKRHRH
310 320 330 340 350
RSRSSSCSRS RSHQRSGHSS RDRSRERSRR RSSKERFRDQ DLASRDRDRS
360 370 380
SRDRSPRDRD RKDKKRSYES ANGRSEDRRS SEEREAGEI
Computationally mapped potential isoform sequencesi
There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketA0A5F5PEJ2 | A0A5F5PEJ2_HORSE | Uncharacterized protein | FMC1-LUC7L2 | 392 | Annotation score: | ||
A0A5F5PG81 | A0A5F5PG81_HORSE | Uncharacterized protein | FMC1-LUC7L2 | 391 | Annotation score: |
Genome annotation databases
Ensembli | ENSECAT00000026628; ENSECAP00000022232; ENSECAG00000024679 |
Similar proteinsi
Cross-referencesi
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Proteomic databases
PaxDbi | F6SR70 |
PRIDEi | F6SR70 |
Genome annotation databases
Ensembli | ENSECAT00000026628; ENSECAP00000022232; ENSECAG00000024679 |
Phylogenomic databases
GeneTreei | ENSGT00950000183213 |
HOGENOMi | CLU_030397_3_0_1 |
InParanoidi | F6SR70 |
TreeFami | TF317607 |
Gene expression databases
Bgeei | ENSECAG00000024679, Expressed in bone marrow and 23 other tissues |
Family and domain databases
InterProi | View protein in InterPro IPR004882, Luc7-rel |
PANTHERi | PTHR12375, PTHR12375, 1 hit |
Pfami | View protein in Pfam PF03194, LUC7, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | F6SR70_HORSE | |
Accessioni | F6SR70Primary (citable) accession number: F6SR70 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | July 27, 2011 |
Last sequence update: | April 10, 2019 | |
Last modified: | December 2, 2020 | |
This is version 49 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |