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Protein
Submitted name:

Transmembrane protein 41B

Gene

TMEM41B

Organism
Equus caballus (Horse)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Transmembrane protein 41BImported
Gene namesi
Name:TMEM41BImported
OrganismiEquus caballus (Horse)Imported
Taxonomic identifieri9796 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaPerissodactylaEquidaeEquus
Proteomesi
  • UP000002281 Componenti: Chromosome 7

Organism-specific databases

VGNCiVGNC:24292 TMEM41B

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei52 – 72HelicalSequence analysisAdd BLAST21
Transmembranei109 – 135HelicalSequence analysisAdd BLAST27
Transmembranei147 – 170HelicalSequence analysisAdd BLAST24
Transmembranei197 – 216HelicalSequence analysisAdd BLAST20
Transmembranei228 – 249HelicalSequence analysisAdd BLAST22
Transmembranei261 – 282HelicalSequence analysisAdd BLAST22

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiF6SEX4

Expressioni

Gene expression databases

BgeeiENSECAG00000026871 Expressed in 3 organ(s), highest expression level in adult mammalian kidney

Interactioni

Protein-protein interaction databases

STRINGi9796.ENSECAP00000022769

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3140 Eukaryota
COG0398 LUCA
GeneTreeiENSGT00520000055582
InParanoidiF6SEX4
OMAiILPVCFQ
OrthoDBiEOG091G0ONT
TreeFamiTF314301

Family and domain databases

InterProiView protein in InterPro
IPR032816 SNARE_assoc
PfamiView protein in Pfam
PF09335 SNARE_assoc, 1 hit

Sequencei

Sequence statusi: Complete.

F6SEX4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAKGRVAERS QTGALHTTPA GEKAAGTRGP TAPGRGDHLK EKACAEAGSA
60 70 80 90 100
RMSLLILVSI FLSAAFVMFL VYQNFPQLSE EERVNMKVPR DMDDAKALGK
110 120 130 140 150
VLSKYKDTFY VQVLVAYFAT YIFLQTFAIP GSIFLSILSG FLYPFPLALF
160 170 180 190 200
LVCLCSGLGA SFCYMLSYLV GRPVVYKYLT EKAVKWSQQV ERHREHLINY
210 220 230 240 250
IIFLRITPFL PNWFINITSP VINVPLKVFF IGTFLGVAPP SFVAIKAGTT
260 270 280 290
LYQLTTAGEA VSWNSVFVLM ILALLSILPA IFQKKLKQKF E
Length:291
Mass (Da):32,362
Last modified:July 27, 2011 - v1
Checksum:i1D1CA49ABEEDC89B
GO

Sequence databases

RefSeqiXP_001504961.1, XM_001504911.4

Genome annotation databases

EnsembliENSECAT00000028849; ENSECAP00000022769; ENSECAG00000026871
GeneIDi100055636
KEGGiecb:100055636

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_001504961.1, XM_001504911.4

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9796.ENSECAP00000022769

Proteomic databases

PaxDbiF6SEX4

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSECAT00000028849; ENSECAP00000022769; ENSECAG00000026871
GeneIDi100055636
KEGGiecb:100055636

Organism-specific databases

CTDi440026
VGNCiVGNC:24292 TMEM41B

Phylogenomic databases

eggNOGiKOG3140 Eukaryota
COG0398 LUCA
GeneTreeiENSGT00520000055582
InParanoidiF6SEX4
OMAiILPVCFQ
OrthoDBiEOG091G0ONT
TreeFamiTF314301

Gene expression databases

BgeeiENSECAG00000026871 Expressed in 3 organ(s), highest expression level in adult mammalian kidney

Family and domain databases

InterProiView protein in InterPro
IPR032816 SNARE_assoc
PfamiView protein in Pfam
PF09335 SNARE_assoc, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiF6SEX4_HORSE
AccessioniPrimary (citable) accession number: F6SEX4
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: November 7, 2018
This is version 32 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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