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Protein
Submitted name:

Sec1 family domain containing 1

Gene

SCFD1

Organism
Ornithorhynchus anatinus (Duckbill platypus)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Sec1 family domain containing 1Imported
Gene namesi
Name:SCFD1Imported
OrganismiOrnithorhynchus anatinus (Duckbill platypus)Imported
Taxonomic identifieri9258 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaMonotremataOrnithorhynchidaeOrnithorhynchus
Proteomesi
  • UP000002279 Componenti: Chromosome 4

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSOANG00000014020

Interactioni

Protein-protein interaction databases

STRINGi9258.ENSOANP00000022110

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili421 – 441Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the STXBP/unc-18/SEC1 family.SAAS annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG1301 Eukaryota
COG5158 LUCA
GeneTreeiENSGT00550000074845
InParanoidiF6R556
OrthoDBiEOG091G04JV
TreeFamiTF105740

Family and domain databases

Gene3Di3.40.50.1910, 2 hits
InterProiView protein in InterPro
IPR027482 Sec-1-like_dom2
IPR001619 Sec1-like
IPR036045 Sec1-like_sf
PANTHERiPTHR11679 PTHR11679, 1 hit
PfamiView protein in Pfam
PF00995 Sec1, 1 hit
PIRSFiPIRSF005715 VPS45_Sec1, 1 hit
SUPFAMiSSF56815 SSF56815, 1 hit

Sequencei

Sequence statusi: Complete.

F6R556-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNALRAGPCT SSGGGWAAPP PVTCGSMGGA GPQHVSGGGL PPPPARASPF
60 70 80 90 100
GSARTATSSC SWARALPPSS APLSPPPPFP GPAGRWMVAA KMAAAASIRE
110 120 130 140 150
RQTVALKRML NFNVPHVKNS TGEPVWKVLI YDRFGQDIIS PLLSVKELRD
160 170 180 190 200
MGITLHLLLH SDRDPIPDVP AVYFVMPTEE NIDRMCQDLR NQLYESYYLN
210 220 230 240 250
FISAISRSKL EDIANAALGA SAVTQVAKVF DQYLNFITLE DDMFVLCNQN
260 270 280 290 300
KELISYRAIN RSDITDTEME TIMDTIVDSL FCFFVTLGAV PIIRCSRGTA
310 320 330 340 350
AEMVAVKLDK KLRENLRDAR NSLFTGDTLG AGQFSFQRPL LVLIDRNIDL
360 370 380 390 400
ATPLHHTWTY QALVHDVLDF HLNRVSLEES SGTENSPAGA RPKRKNKKSY
410 420 430 440 450
DLTATDKFWQ KHKGSPFPEV AESVQQELES YRAQEDEVKR LKSIMGLEGE
460 470 480 490 500
DEGAISMLSD NTAKLTSAVS SLPELLEKKR LIDLHTNVAT AVLEHIKTRK
510 520 530 540 550
LDVYFEYEEK IMSKTTLDKS LLDMISDPDA GTPEDKMRLF LIYYISAQQV
560 570 580 590 600
PSEADLEQYK KALTDAGCNL TPLHYIKQWK AFAKMASAPT SYGNAAAKPM
610 620 630 640 650
GLLSRVMNTG SQFVMEGVKN LVLKQQNLPV TRILDNLMEM KSNPETDDYR
660 670 680 690 700
YFDPKMLRGS DSSVPRNKNP FQEAIVFVVG GGNYIEYQNL VDYIKSKQGK
710 720
HVLYGCSELF NAAQFVKQLS QLGQK
Length:725
Mass (Da):80,414
Last modified:January 9, 2013 - v2
Checksum:iF9B34CE686151B7F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAPN01002949 Genomic DNA No translation available.
AAPN01002950 Genomic DNA No translation available.
AAPN01002951 Genomic DNA No translation available.
AAPN01002952 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSOANT00000022114; ENSOANP00000022110; ENSOANG00000014020

Similar proteinsi

Entry informationi

Entry nameiF6R556_ORNAN
AccessioniPrimary (citable) accession number: F6R556
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: January 9, 2013
Last modified: May 23, 2018
This is version 34 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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