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Entry version 71 (29 Sep 2021)
Sequence version 1 (27 Jul 2011)
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Protein
Submitted name:

Kalirin

Gene

Kalrn

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

LigandATP-bindingARBA annotation, Nucleotide-binding

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
KalirinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:KalrnImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 16

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:2685385, Kalrn

Eukaryotic Pathogen, Vector and Host Database Resources

More...
VEuPathDBi
HostDB:ENSMUSG00000061751

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Keywords - Cellular componenti

CytoplasmARBA annotation

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

MaxQB - The MaxQuant DataBase

More...
MaxQBi
F6QYT9

PRoteomics IDEntifications database

More...
PRIDEi
F6QYT9

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
326682

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000061751, Expressed in cingulate cortex and 276 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
F6QYT9, baseline and differential

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini13 – 158CRAL-TRIOInterPro annotationAdd BLAST146
Domaini1250 – 1425DHInterPro annotationAdd BLAST176
Domaini1437 – 1549PHInterPro annotationAdd BLAST113
Domaini1615 – 1680SH3InterPro annotationAdd BLAST66
Domaini1896 – 2071DHInterPro annotationAdd BLAST176
Domaini2083 – 2193PHInterPro annotationAdd BLAST111
Domaini2288 – 2353SH3InterPro annotationAdd BLAST66

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni686 – 713DisorderedSequence analysisAdd BLAST28
Regioni1564 – 1611DisorderedSequence analysisAdd BLAST48
Regioni1695 – 1821DisorderedSequence analysisAdd BLAST127
Regioni1865 – 1884DisorderedSequence analysisAdd BLAST20
Regioni2212 – 2281DisorderedSequence analysisAdd BLAST70

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili718 – 738Sequence analysisAdd BLAST21
Coiled coili836 – 856Sequence analysisAdd BLAST21
Coiled coili897 – 924Sequence analysisAdd BLAST28
Coiled coili1226 – 1246Sequence analysisAdd BLAST21

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi699 – 713Polar residuesSequence analysisAdd BLAST15
Compositional biasi1586 – 1611Polar residuesSequence analysisAdd BLAST26
Compositional biasi1695 – 1741Polar residuesSequence analysisAdd BLAST47
Compositional biasi1750 – 1772Basic and acidic residuesSequence analysisAdd BLAST23
Compositional biasi1781 – 1805Basic and acidic residuesSequence analysisAdd BLAST25
Compositional biasi2253 – 2267Polar residuesSequence analysisAdd BLAST15

Keywords - Domaini

Coiled coilSequence analysis, SH3 domainPROSITE-ProRule annotationARBA annotation

Phylogenomic databases

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000155248

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_000373_2_0_1

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00160, RhoGEF, 2 hits
cd00170, SEC14, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.20.900.10, 2 hits
2.30.29.30, 2 hits
3.40.525.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR001251, CRAL-TRIO_dom
IPR036865, CRAL-TRIO_dom_sf
IPR035899, DBL_dom_sf
IPR000219, DH-domain
IPR028570, Kalirin/TRIO
IPR011993, PH-like_dom_sf
IPR001849, PH_domain
IPR036028, SH3-like_dom_sf
IPR001452, SH3_domain
IPR018159, Spectrin/alpha-actinin
IPR002017, Spectrin_repeat

The PANTHER Classification System

More...
PANTHERi
PTHR22826:SF104, PTHR22826:SF104, 2 hits

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF13716, CRAL_TRIO_2, 1 hit
PF00169, PH, 1 hit
PF00621, RhoGEF, 2 hits
PF00018, SH3_1, 1 hit
PF00435, Spectrin, 4 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00233, PH, 2 hits
SM00325, RhoGEF, 2 hits
SM00516, SEC14, 1 hit
SM00326, SH3, 2 hits
SM00150, SPEC, 7 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48065, SSF48065, 2 hits
SSF50044, SSF50044, 2 hits
SSF52087, SSF52087, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50191, CRAL_TRIO, 1 hit
PS50010, DH_2, 2 hits
PS50003, PH_DOMAIN, 2 hits
PS50002, SH3, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Fragment.

This entry has 1 described isoform and 7 potential isoforms that are computationally mapped.Show allAlign All

F6QYT9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
XSFRNDGLKA SDVLPILKEK VAFVSGGRDK RGGPILTFPA RSNHDRIRQE
60 70 80 90 100
DLRKLVTYLA SVPSEDVCKR GFTVIIDMRG SKWDLIKPLL KTLQEAFPAE
110 120 130 140 150
IHVALIIKPD NFWQKQKTNF GSSKFIFETS MVSVEGLTKL VDPSQLTEEF
160 170 180 190 200
DGSLDYNHEE WIELRLSLEE FFNSAVHLLS RLEDLQEMLA RKEFPVDVEG
210 220 230 240 250
SRRLIDEHTQ LKKKVLKAPV EELDREGQRL LQCIRCSDGF SGRNCIPGSA
260 270 280 290 300
DFQSLVPKIT SLLDKLHSTR QHLHQMWHVR KLKLDQCFQL RLFEQDAEKM
310 320 330 340 350
FDWISHNKEL FLQSHTEIGV SYQHALDLQT QHNHFAMNSM NAYVNINRIM
360 370 380 390 400
SVASRLSEAG HYASQQIKQI STQLDQEWKS FAAALDERST ILAMSAVFHQ
410 420 430 440 450
KAEQFLSGVD AWCKMCSEGG LPSEMQDLEL AIHHHQSLYE QVTQAYTEVS
460 470 480 490 500
QDGKALLDVL QRPLSPGNSE SLTATANYSK AVHQVLDVVH EVLHHQRRLE
510 520 530 540 550
SIWQHRKVRL HQRLQLCVFQ QDVQQVLDWI ENHGEAFLSK HTGVGKSLHR
560 570 580 590 600
ARALQKRHDD FEEVAQNTYT NADKLLEAAE QLAQTGECDP EEIYKAARHL
610 620 630 640 650
EVRIQDFVRR VEQRKLLLDM SVSFHTHTKE LWTWMEDLQK EVLEDVCADS
660 670 680 690 700
VDAVQELIKQ FQQQQTATLD ATLNVIKEGE DLIQQLRSAP PSLGEPTEAR
710 720 730 740 750
DSAMSNNKTP HSSSISHIES VLQQLDDAQV QMEELFHERK IKLDIFLQLR
760 770 780 790 800
IFEQYTIEVT AELDAWNEDL LRQMNDFNTE DLTLAEQRLQ RHTERKLAMN
810 820 830 840 850
NMTFEVIQQG QDLHQYIMEV QASGIELICE KDLDLAAQVQ ELLEFLHEKQ
860 870 880 890 900
HELELNAEQT HKRLEQCLQL RHLQAEVKQV LGWIRNGESM LNASLVNASS
910 920 930 940 950
LSEAEQLQRE HEQFQLAIEK THQSALQVQQ KAEALLQAGH YDADAIRECA
960 970 980 990 1000
EKVALHWQQL MLKMEDRLKL VNASVAFYKT SEQVCSVLES LEQEYRRDED
1010 1020 1030 1040 1050
WCGGRDKLGP AAEMDHVIPL LSKHLEQKEA FLKACTLARR NAEVFLKYIH
1060 1070 1080 1090 1100
RNNVSMPSVA SHTRGPEQQV KAILSELLQR ENRVLHFWTL KKRRLDQCQQ
1110 1120 1130 1140 1150
YVVFERSAKQ ALDWIQETGE YYLSTHTSTG ETTEETQELL KEYGEFRVPA
1160 1170 1180 1190 1200
KQTKEKVKLL IQLADSFVEK GHIHATEIRK WVTTVDKHYR DFSLRMGKYR
1210 1220 1230 1240 1250
YSLEKALGVN TEDNKDLELD IIPASLSDRE VKLRDANHEI NEEKRKSARK
1260 1270 1280 1290 1300
KEFIMAELLQ TEKAYVRDLH ECLETYLWEM TSGVEEIPPG ILNKEHIIFG
1310 1320 1330 1340 1350
NIQEIYDFHN NIFLKELEKY EQLPEDVGHC FVTWADKFQM YVTYCKNKPD
1360 1370 1380 1390 1400
SNQLILEHAG TFFDEIQQRH GLANSISSYL IKPVQRVTKY QLLLKELLTC
1410 1420 1430 1440 1450
CEEGKGELKD GLEVMLSVPK KANDAMHVSM LEGFDENLDV QGELILQDAF
1460 1470 1480 1490 1500
QVWDPKSLIR KGRERHLFLF EISLVFSKEI KDSSGHTKYV YKNKLLTSEL
1510 1520 1530 1540 1550
GVTEHVEGDP CKFALWSGRT PSSDNKTVLK ASNIETKQEW IKNIREVIQE
1560 1570 1580 1590 1600
RIIHLKGALK EPIQLPKTPA KLRNNSKRDG VEDGDSQGDG SSQPDTISIA
1610 1620 1630 1640 1650
SRTSQNTVES DKLSGGCELT VVLQDFSAGH SSELSIQVGQ TVELLERPSE
1660 1670 1680 1690 1700
RPGWCLVRTT ERSPPQEGLV PSSALCISHS RSSVEMDCFF PLKDSYSHSS
1710 1720 1730 1740 1750
SENGGKSESV AHLQSQPSLN SIHSSPGPKR STNTLKKWLT SPVRRLNSGK
1760 1770 1780 1790 1800
ADGNIKKQKK VRDGRKSFDL GSPKPGDETT PQGDSADEKS KKGWGEDEPD
1810 1820 1830 1840 1850
EESHTPLPPP MKIFDNDPTQ DEMSSLLAAR QAPPDVPTAA DLVSAIEKLV
1860 1870 1880 1890 1900
KNKLTLEGGS YRGSLKDPTG CLNEGMTPPT PPRNLEEEQK AKALRGRMFV
1910 1920 1930 1940 1950
LNELVQTEKD YVKDLGIVVE GFMKRIEEKG VPEDMRGKEK IVFGNIHQIY
1960 1970 1980 1990 2000
DWHKDFFLAE LEKCIQEQDR LAQLFIKHER KLHIYVWYCQ NKPRSEYIVA
2010 2020 2030 2040 2050
EYDAYFEEVK QEINQRLTLS DFLIKPIQRI TKYQLLLKDF LRYSEKAGLE
2060 2070 2080 2090 2100
CSDIEKAVEL MCLVPKRCND MMNLGRLQGF EGTLTAQGKL LQQDTFYVIE
2110 2120 2130 2140 2150
LDAGMQSRTK ERRVFLFEQI VIFSELLRKG SLTPGYMFKR SIKMNYLVLE
2160 2170 2180 2190 2200
DNVDGDPCKF ALMNRETSER VILQAANSDI QQAWVQDINQ VLETQRDFLN
2210 2220 2230 2240 2250
ALQSPIEYQR KERSTAVIRS QPPRVPQASP RPYSSGPVGS EKPPKGSSYN
2260 2270 2280 2290 2300
PPLPPLKIST SNGSPGFDYH QPGDKFDASK QNDLGGCNGT STMTVIKDYY
2310 2320 2330 2340 2350
ALKENEICVS QGEVVQVLAV NQQNMCLVYQ PASDHSPAAE GWVPGSILAP
2360 2370
LAKATAAAES SDGSIKTLLK P
Length:2,371
Mass (Da):270,765
Last modified:July 27, 2011 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i9986ED5E1D9EF889
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 7 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A2CG49KALRN_MOUSE
Kalirin
Kalrn
2,964Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
D3Z4R2D3Z4R2_MOUSE
Non-specific serine/threonine prote...
Kalrn
1,295Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
B1B1A7B1B1A7_MOUSE
Kalirin
Kalrn
1,403Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
D3Z560D3Z560_MOUSE
Kalirin
Kalrn
823Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
D3Z534D3Z534_MOUSE
Kalirin
Kalrn
674Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
D3Z535D3Z535_MOUSE
Kalirin
Kalrn
739Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
D3Z532D3Z532_MOUSE
Kalirin
Kalrn
705Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section is used for sequence fragments to indicate that the residue at the extremity of the sequence is not the actual terminal residue in the complete protein sequence.<p><a href='/help/non_ter' target='_top'>More...</a></p>Non-terminal residuei1Imported1

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000142817; ENSMUSP00000116188; ENSMUSG00000061751

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

Proteomic databases

MaxQBiF6QYT9
PRIDEiF6QYT9
ProteomicsDBi326682

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...
Antibodypediai
2142, 177 antibodies

Genome annotation databases

EnsembliENSMUST00000142817; ENSMUSP00000116188; ENSMUSG00000061751

Organism-specific databases

MGIiMGI:2685385, Kalrn
VEuPathDBiHostDB:ENSMUSG00000061751

Phylogenomic databases

GeneTreeiENSGT00940000155248
HOGENOMiCLU_000373_2_0_1

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...
ChiTaRSi
Kalrn, mouse

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000061751, Expressed in cingulate cortex and 276 other tissues
ExpressionAtlasiF6QYT9, baseline and differential

Family and domain databases

CDDicd00160, RhoGEF, 2 hits
cd00170, SEC14, 1 hit
Gene3Di1.20.900.10, 2 hits
2.30.29.30, 2 hits
3.40.525.10, 1 hit
InterProiView protein in InterPro
IPR001251, CRAL-TRIO_dom
IPR036865, CRAL-TRIO_dom_sf
IPR035899, DBL_dom_sf
IPR000219, DH-domain
IPR028570, Kalirin/TRIO
IPR011993, PH-like_dom_sf
IPR001849, PH_domain
IPR036028, SH3-like_dom_sf
IPR001452, SH3_domain
IPR018159, Spectrin/alpha-actinin
IPR002017, Spectrin_repeat
PANTHERiPTHR22826:SF104, PTHR22826:SF104, 2 hits
PfamiView protein in Pfam
PF13716, CRAL_TRIO_2, 1 hit
PF00169, PH, 1 hit
PF00621, RhoGEF, 2 hits
PF00018, SH3_1, 1 hit
PF00435, Spectrin, 4 hits
SMARTiView protein in SMART
SM00233, PH, 2 hits
SM00325, RhoGEF, 2 hits
SM00516, SEC14, 1 hit
SM00326, SH3, 2 hits
SM00150, SPEC, 7 hits
SUPFAMiSSF48065, SSF48065, 2 hits
SSF50044, SSF50044, 2 hits
SSF52087, SSF52087, 1 hit
PROSITEiView protein in PROSITE
PS50191, CRAL_TRIO, 1 hit
PS50010, DH_2, 2 hits
PS50003, PH_DOMAIN, 2 hits
PS50002, SH3, 2 hits

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiF6QYT9_MOUSE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: F6QYT9
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: September 29, 2021
This is version 71 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Proteomics identificationCombined sources, Reference proteomeImported
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