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Protein
Submitted name:

SIN3-HDAC complex-associated factor

Gene

SINHCAF

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
SIN3-HDAC complex-associated factorImported
Gene namesi
Name:SINHCAFImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 12

Organism-specific databases

EuPathDBiHostDB:ENSG00000139146.13
HGNCiHGNC:30702 SINHCAF

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000139146

PTM / Processingi

Proteomic databases

PeptideAtlasiF5H6U2
PRIDEiF5H6U2

Expressioni

Gene expression databases

BgeeiENSG00000139146 Expressed in 89 organ(s), highest expression level in kidney
ExpressionAtlasiF5H6U2 baseline and differential

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410IKPK Eukaryota
ENOG4111PRH LUCA
GeneTreeiENSGT00390000006485

Family and domain databases

InterProiView protein in InterPro
IPR026065 FAM60A
PANTHERiPTHR13422 PTHR13422, 1 hit
PfamiView protein in Pfam
PF15396 FAM60A, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All

F5H6U2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MFGFHKPKMY RSIEGCCICR AKSSSSRFTD SKRYEKDFQS CFGLHETRSG
60 70 80 90 100
DICNACVLLV KRWKKLPAGS KKNWNHVVDA RAGPSLKTTL KPKKVKTLSG
110 120
NRIKSNQISK LQKEFKRHNS DAHSTT
Length:126
Mass (Da):14,364
Last modified:October 5, 2016 - v8
Checksum:iBF5000BD8891D3F6
GO

Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q9NP50SHCAF_HUMAN
SIN3-HDAC complex-associated factor
SINHCAF C12orf14, FAM60A, L4
221Annotation score:
F5GZ82F5GZ82_HUMAN
SIN3-HDAC complex-associated factor
SINHCAF
134Annotation score:
H0YGG0H0YGG0_HUMAN
SIN3-HDAC complex-associated factor
SINHCAF
59Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei126Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC024940 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000543615; ENSP00000437363; ENSG00000139146
ENST00000632726; ENSP00000487725; ENSG00000276371
UCSCiuc058mmf.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC024940 Genomic DNA No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiF5H6U2
PRIDEiF5H6U2

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000543615; ENSP00000437363; ENSG00000139146
ENST00000632726; ENSP00000487725; ENSG00000276371
UCSCiuc058mmf.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000139146.13
HGNCiHGNC:30702 SINHCAF
OpenTargetsiENSG00000139146
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410IKPK Eukaryota
ENOG4111PRH LUCA
GeneTreeiENSGT00390000006485

Gene expression databases

BgeeiENSG00000139146 Expressed in 89 organ(s), highest expression level in kidney
ExpressionAtlasiF5H6U2 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR026065 FAM60A
PANTHERiPTHR13422 PTHR13422, 1 hit
PfamiView protein in Pfam
PF15396 FAM60A, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiF5H6U2_HUMAN
AccessioniPrimary (citable) accession number: F5H6U2
Entry historyiIntegrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: October 5, 2016
Last modified: September 12, 2018
This is version 50 of the entry and version 8 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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