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Protein
Submitted name:

C-type lectin domain family 4 member E

Gene

CLEC4E

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
C-type lectin domain family 4 member EImported
Gene namesi
Name:CLEC4EImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 12

Organism-specific databases

EuPathDBiHostDB:ENSG00000166523.7
HGNCiHGNC:14555 CLEC4E

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei21 – 49HelicalSequence analysisAdd BLAST29

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000166523

PTM / Processingi

Proteomic databases

PeptideAtlasiF5H5X7
PRIDEiF5H5X7

Expressioni

Gene expression databases

BgeeiENSG00000166523
ExpressionAtlasiF5H5X7 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliF5H5X7
SMRiF5H5X7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini65 – 161C-type lectinInterPro annotationAdd BLAST97

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

GeneTreeiENSGT00760000118924

Family and domain databases

Gene3Di3.10.100.10, 1 hit
InterProiView protein in InterPro
IPR001304 C-type_lectin-like
IPR016186 C-type_lectin-like/link_sf
IPR016187 CTDL_fold
PfamiView protein in Pfam
PF00059 Lectin_C, 1 hit
SMARTiView protein in SMART
SM00034 CLECT, 1 hit
SUPFAMiSSF56436 SSF56436, 1 hit
PROSITEiView protein in PROSITE
PS50041 C_TYPE_LECTIN_2, 1 hit

Sequencei

Sequence statusi: Complete.

F5H5X7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNSSKSSETQ CTERGCFSSQ MFLWTVAGIP ILFLSACFIT RCVVTFRIFQ
60 70 80 90 100
TCDEKKFQLP ENFTELSCYN YGSGIIVPKE FLSYKKPKMR EFFIGLSDQV
110 120 130 140 150
VEGQWQWVDG TPLTKSLSFW DVGEPNNIAT LEDCATMRDS SNPRQNWNDV
160 170
TCFLNYFRIC EMVGINPLNK GKSL
Length:174
Mass (Da):19,960
Last modified:June 28, 2011 - v1
Checksum:i8539859C5DF18E00
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC092746 Genomic DNA No translation available.
RefSeqiXP_011518917.1, XM_011520615.1
UniGeneiHs.236516

Genome annotation databases

EnsembliENST00000545274; ENSP00000443034; ENSG00000166523
GeneIDi26253
UCSCiuc058kwq.1 human

Similar proteinsi

Entry informationi

Entry nameiF5H5X7_HUMAN
AccessioniPrimary (citable) accession number: F5H5X7
Entry historyiIntegrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: May 23, 2018
This is version 51 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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