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Protein
Submitted name:

Knotted-like homeobox KNOX3

Gene
N/A
Organism
Fragaria vesca (Woodland strawberry) (Potentilla vesca)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi251 – 314Homeobox; TALE-typePROSITE-ProRule annotationAdd BLAST64

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Knotted-like homeobox KNOX3Imported
OrganismiFragaria vesca (Woodland strawberry) (Potentilla vesca)Imported
Taxonomic identifieri57918 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsRosalesRosaceaeRosoideaePotentilleaeFragariinaeFragaria

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliF5A6B3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini230 – 250ELKInterPro annotationAdd BLAST21
Domaini250 – 313HomeoboxInterPro annotationAdd BLAST64

Sequence similaritiesi

Belongs to the TALE/KNOX homeobox family.PROSITE-ProRule annotation

Keywords - Domaini

HomeoboxPROSITE-ProRule annotationSAAS annotationImported

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR005539 ELK_dom
IPR009057 Homeobox-like_sf
IPR017970 Homeobox_CS
IPR001356 Homeobox_dom
IPR008422 Homeobox_KN_domain
IPR005540 KNOX1
IPR005541 KNOX2
PfamiView protein in Pfam
PF05920 Homeobox_KN, 1 hit
PF03790 KNOX1, 1 hit
PF03791 KNOX2, 1 hit
SMARTiView protein in SMART
SM00389 HOX, 1 hit
SM01255 KNOX1, 1 hit
SM01256 KNOX2, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS51213 ELK, 1 hit
PS00027 HOMEOBOX_1, 1 hit
PS50071 HOMEOBOX_2, 1 hit

Sequencei

Sequence statusi: Complete.

F5A6B3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MESERWSRVP KGRETEKMES GMGKSNYYYS HGVMGSAGSS SGMLMPPPLV
60 70 80 90 100
NSYAAAAADQ TSSSSNHQHC FVSLPFTNIN PNQNGSQEYE MRMKTKVMSH
110 120 130 140 150
PLFPRLLASY VNCQKVGAPA EVVARLEDAA AASISSSAAL SAACEESEPD
160 170 180 190 200
PELDQFMEAY CEMLTKYHEE LTKPFHEAML GLSKINSQLK ALSVSPSYSA
210 220 230 240 250
STGDLVGQGG SSEEAGVNEN CIDPRAKDWD IRAKLLQKYG GSLGSLSQEL
260 270 280 290 300
KKKKKNGKLP KEARVQLQEW WSRNYTWPYP SEPQKLALAA STGLTVKQIN
310 320 330 340 350
NWFINQRKRH WKPSAEGMQL AMVDHSFQKM VDHPQFFYNY MDHLICNPSP
360
MDCTSTPMVD
Length:360
Mass (Da):40,029
Last modified:June 28, 2011 - v1
Checksum:i9BC6A8BB670C87E1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HQ413776 mRNA Translation: AEC04752.1
RefSeqiNP_001267003.1, NM_001280074.1

Genome annotation databases

GeneIDi101300202

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HQ413776 mRNA Translation: AEC04752.1
RefSeqiNP_001267003.1, NM_001280074.1

3D structure databases

ProteinModelPortaliF5A6B3
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi101300202

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR005539 ELK_dom
IPR009057 Homeobox-like_sf
IPR017970 Homeobox_CS
IPR001356 Homeobox_dom
IPR008422 Homeobox_KN_domain
IPR005540 KNOX1
IPR005541 KNOX2
PfamiView protein in Pfam
PF05920 Homeobox_KN, 1 hit
PF03790 KNOX1, 1 hit
PF03791 KNOX2, 1 hit
SMARTiView protein in SMART
SM00389 HOX, 1 hit
SM01255 KNOX1, 1 hit
SM01256 KNOX2, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS51213 ELK, 1 hit
PS00027 HOMEOBOX_1, 1 hit
PS50071 HOMEOBOX_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiF5A6B3_FRAVE
AccessioniPrimary (citable) accession number: F5A6B3
Entry historyiIntegrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: October 10, 2018
This is version 43 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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