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Protein

B3 domain-containing protein REM-like 3

Gene

At5g32460

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi11 – 103TF-B3 1PROSITE-ProRule annotationAdd BLAST93
DNA bindingi144 – 241TF-B3 2PROSITE-ProRule annotationAdd BLAST98
DNA bindingi296 – 393TF-B3 3PROSITE-ProRule annotationAdd BLAST98
DNA bindingi431 – 530TF-B3 4PROSITE-ProRule annotationAdd BLAST100

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
B3 domain-containing protein REM-like 3
Alternative name(s):
Protein REPRODUCTIVE MERISTEM-like 3
Gene namesi
Ordered Locus Names:At5g32460
ORF Names:F18O9.70
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

AraportiAT5G32460
TAIRilocus:2145811 AT5G32460

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004128401 – 530B3 domain-containing protein REM-like 3Add BLAST530

Proteomic databases

PaxDbiF4KFT6
PRIDEiF4KFT6

Expressioni

Gene expression databases

ExpressionAtlasiF4KFT6 baseline and differential
GenevisibleiF4KFT6 AT

Structurei

3D structure databases

ProteinModelPortaliF4KFT6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Repeat

Phylogenomic databases

InParanoidiF4KFT6
OMAiWKSFCEA
OrthoDBiEOG09360BFM

Family and domain databases

CDDicd10017 B3_DNA, 4 hits
Gene3Di2.40.330.10, 4 hits
InterProiView protein in InterPro
IPR003340 B3_DNA-bd
IPR015300 DNA-bd_pseudobarrel_sf
IPR039218 REM_fam
PANTHERiPTHR31674 PTHR31674, 2 hits
PfamiView protein in Pfam
PF02362 B3, 4 hits
SMARTiView protein in SMART
SM01019 B3, 4 hits
SUPFAMiSSF101936 SSF101936, 4 hits
PROSITEiView protein in PROSITE
PS50863 B3, 4 hits

Sequencei

Sequence statusi: Complete.

F4KFT6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTDAMFSSSA KPHFIKPMLP GFETYIVIPK AFYSNYLEGR QEGNAAELRS
60 70 80 90 100
DATEITWKIK IDGRRMTKGW EEFAVAHNLQ VDDILVFRHE GNLLFHVTPF
110 120 130 140 150
GLSFCEILYS QRDEKDVKDT TGKVTRSRTV KKNGKNECSS VDTDFVVPVT
160 170 180 190 200
ASNQRVDSFY LPRGFTTSSG SSKLCNEIIL IDEKDRPSTL KLRYNKSSNR
210 220 230 240 250
FCVSRGWRAF CCRNGYRTGC FLRIILVRKG KTPVLRIFPL ERDEDNIEKH
260 270 280 290 300
SKKVKQEVEH EESVKEETNV ESGKLKRDRL LQKDPKNLCS TSQDTNFVVP
310 320 330 340 350
VTASNQRHDS FHLPKGLTTS SGLSKLCKKI IFMDQKGRSS ILDLSYSISD
360 370 380 390 400
DRFTVRRGWK AFCCRNEHKT GCFLRLILVQ NGKTPVLRIF PLERYENSIA
410 420 430 440 450
KNSKKIKQEV EYESAKEEKN LESLSLSDNS SFVVSVTVSN LSEDILHLPI
460 470 480 490 500
RLSRSNLLDK KIHEIVLMNK EGRTWILSLK YSKYSGRFRI TRGWKSFCEA
510 520 530
NGQKPGCTFL LKLHLSMTRF DQDGVAWDKK
Length:530
Mass (Da):60,888
Last modified:June 28, 2011 - v1
Checksum:iEA0FA6E26036B4FD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF296831 Genomic DNA No translation available.
CP002688 Genomic DNA Translation: AED93883.1
RefSeqiNP_001154745.1, NM_001161273.2

Genome annotation databases

EnsemblPlantsiAT5G32460.1; AT5G32460.1; AT5G32460
GeneIDi3771028
GrameneiAT5G32460.1; AT5G32460.1; AT5G32460
KEGGiath:AT5G32460

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF296831 Genomic DNA No translation available.
CP002688 Genomic DNA Translation: AED93883.1
RefSeqiNP_001154745.1, NM_001161273.2

3D structure databases

ProteinModelPortaliF4KFT6
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiF4KFT6
PRIDEiF4KFT6

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G32460.1; AT5G32460.1; AT5G32460
GeneIDi3771028
GrameneiAT5G32460.1; AT5G32460.1; AT5G32460
KEGGiath:AT5G32460

Organism-specific databases

AraportiAT5G32460
TAIRilocus:2145811 AT5G32460

Phylogenomic databases

InParanoidiF4KFT6
OMAiWKSFCEA
OrthoDBiEOG09360BFM

Miscellaneous databases

PROiPR:F4KFT6

Gene expression databases

ExpressionAtlasiF4KFT6 baseline and differential
GenevisibleiF4KFT6 AT

Family and domain databases

CDDicd10017 B3_DNA, 4 hits
Gene3Di2.40.330.10, 4 hits
InterProiView protein in InterPro
IPR003340 B3_DNA-bd
IPR015300 DNA-bd_pseudobarrel_sf
IPR039218 REM_fam
PANTHERiPTHR31674 PTHR31674, 2 hits
PfamiView protein in Pfam
PF02362 B3, 4 hits
SMARTiView protein in SMART
SM01019 B3, 4 hits
SUPFAMiSSF101936 SSF101936, 4 hits
PROSITEiView protein in PROSITE
PS50863 B3, 4 hits
ProtoNetiSearch...

Entry informationi

Entry nameiREML3_ARATH
AccessioniPrimary (citable) accession number: F4KFT6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 21, 2011
Last sequence update: June 28, 2011
Last modified: July 18, 2018
This is version 41 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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Main funding by: National Institutes of Health

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