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Entry version 71 (07 Oct 2020)
Sequence version 1 (28 Jun 2011)
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Protein

COP1-interactive protein 1

Gene

CIP1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Positive regulator of abscisic acid (ABA)-mediated signaling pathways involved in abiotic stress responses (e.g. osmotic stress) and leading to various plant adaptation (e.g. stomata closure).1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Biological processAbscisic acid signaling pathway

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
COP1-interactive protein 11 Publication
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:CIP11 Publication
Ordered Locus Names:At5g41790Imported
ORF Names:K16L22.7Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 5

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT5G41790

The Arabidopsis Information Resource

More...
TAIRi
locus:2152985, AT5G41790

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Keywords - Cellular componenti

Cell membrane, Cytoplasm, Cytoskeleton, Membrane

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the 'Pathology and Biotech' section describes the in vivo effects caused by ablation of the gene (or one or more transcripts) coding for the protein described in the entry. This includes gene knockout and knockdown, provided experiments have been performed in the context of a whole organism or a specific tissue, and not at the single-cell level.<p><a href='/help/disruption_phenotype' target='_top'>More...</a></p>Disruption phenotypei

Short hypocotyls. Increased sensitivity to osmotic stress (e.g. mannitol), but reduced sensitivity to abscisic acid (ABA) associated with lower levels of abiotic stress-related gene expression but higher ABA biosynthesis genes levels.1 Publication

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00004418931 – 1586COP1-interactive protein 1Add BLAST1586

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
F4JZY1

PRoteomics IDEntifications database

More...
PRIDEi
F4JZY1

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
246946

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
F4JZY1

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified 'at protein level'.<br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Mainly expressed in photosynthetic and vascular tissues. Accumulates in both dark-grown and light-grown seedlings roots and shoots, leaves and flowers (at protein level).1 Publication

<p>This subsection of the 'Expression' section provides information on the expression of the gene product at various stages of a cell, tissue or organism development. By default, the information is derived from experiments at the mRNA level, unless specified 'at the protein level'.<p><a href='/help/developmental_stage' target='_top'>More...</a></p>Developmental stagei

In seedlings, accumulates in cotyledons and the hypocotyl, especially in the vein. In adult plants, mainly detected in mature leaves, particularly in vascular tissues. Also present in the vein of sepals and petals of flowers.1 Publication

<p>This subsection of the 'Expression' section reports the experimentally proven effects of inducers and repressors (usually chemical compounds or environmental factors) on the level of protein (or mRNA) expression (up-regulation, down-regulation, constitutive expression).<p><a href='/help/induction' target='_top'>More...</a></p>Inductioni

Induced by osmotic stress (e.g. mannitol) and abscisic acid (ABA).1 Publication

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
F4JZY1, baseline and differential

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Interacts with COP1 coiled-coil region.

1 Publication

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction%5Fsection">Interaction</a>' section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="https://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated at every <a href="http://www.uniprot.org/help/synchronization">UniProt release</a>.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

GO - Molecular functioni

Protein-protein interaction databases

Protein interaction database and analysis system

More...
IntActi
F4JZY1, 1 interactor

STRING: functional protein association networks

More...
STRINGi
3702.AT5G41790.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
F4JZY1

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini10 – 84NABPROSITE-ProRule annotationAdd BLAST75
<p>This subsection of the 'Family and Domains' section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati173 – 187LRR 1Sequence analysisAdd BLAST15
Repeati188 – 210LRR 2Sequence analysisAdd BLAST23
Repeati216 – 239LRR 3Sequence analysisAdd BLAST24
Repeati261 – 285LRR 4Sequence analysisAdd BLAST25
Repeati287 – 309LRR 5Sequence analysisAdd BLAST23
Repeati384 – 410LRR 6Sequence analysisAdd BLAST27
Repeati437 – 461LRR 7Sequence analysisAdd BLAST25
Repeati473 – 498LRR 8Sequence analysisAdd BLAST26
Repeati560 – 586LRR 9Sequence analysisAdd BLAST27
Repeati613 – 637LRR 10Sequence analysisAdd BLAST25
Repeati649 – 674LRR 11Sequence analysisAdd BLAST26
Repeati768 – 792LRR 12Sequence analysisAdd BLAST25
Repeati824 – 850LRR 13Sequence analysisAdd BLAST27
Repeati856 – 880LRR 14Sequence analysisAdd BLAST25
Repeati902 – 929LRR 15Sequence analysisAdd BLAST28
Repeati944 – 968LRR 16Sequence analysisAdd BLAST25
Repeati990 – 1014LRR 17Sequence analysisAdd BLAST25
Repeati1077 – 1101LRR 18Sequence analysisAdd BLAST25
Repeati1120 – 1144LRR 19Sequence analysisAdd BLAST25
Repeati1195 – 1220LRR 20Sequence analysisAdd BLAST26
Repeati1247 – 1272LRR 21Sequence analysisAdd BLAST26
Repeati1372 – 1396LRR 22Sequence analysisAdd BLAST25
Repeati1398 – 1417LRR 23Sequence analysisAdd BLAST20
Repeati1426 – 1448LRR 24Sequence analysisAdd BLAST23
Repeati1450 – 1474LRR 25Sequence analysisAdd BLAST25

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili128 – 411Sequence analysisAdd BLAST284
Coiled coili437 – 1196Sequence analysisAdd BLAST760
Coiled coili1225 – 1336Sequence analysisAdd BLAST112
Coiled coili1372 – 1406Sequence analysisAdd BLAST35
Coiled coili1496 – 1530Sequence analysisAdd BLAST35

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi94 – 108Ser-richPROSITE-ProRule annotationAdd BLAST15

Keywords - Domaini

Coiled coil, Leucine-rich repeat, Repeat

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG502QWGN, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_250597_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
F4JZY1

Identification of Orthologs from Complete Genome Data

More...
OMAi
NEHEATM

Database of Orthologous Groups

More...
OrthoDBi
893811at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
F4JZY1

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR011684, NAB

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51774, NAB, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

F4JZY1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKKHKFRETL KSFFEPHFDH EKGEMLKGTK TEIDEKVNKI LGMVESGDVN
60 70 80 90 100
EDESNRQVVA DLVKEFYSEY QSLYRQYDDL TGEIRKKVNG KGESSSSSSS
110 120 130 140 150
DSDSDHSSKR KVKRNGNGKV EKDVELVTGA LKQQIEAANL EIADLKGKLT
160 170 180 190 200
TTVEEKEAVD SELELALMKL KESEEISSKL KLETEKLEDE KSIALSDNRE
210 220 230 240 250
LHQKLEVAGK TETDLNQKLE DIKKERDELQ TERDNGIKRF QEAEKVAEDW
260 270 280 290 300
KTTSDQLKDE TSNLKQQLEA SEQRVSELTS GMNSAEEENK SLSLKVSEIS
310 320 330 340 350
DVIQQGQTTI QELISELGEM KEKYKEKESE HSSLVELHKT HERESSSQVK
360 370 380 390 400
ELEAHIESSE KLVADFTQSL NNAEEEKKLL SQKIAELSNE IQEAQNTMQE
410 420 430 440 450
LMSESGQLKE SHSVKERELF SLRDIHEIHQ RDSSTRASEL EAQLESSKQQ
460 470 480 490 500
VSDLSASLKA AEEENKAISS KNVETMNKLE QTQNTIQELM AELGKLKDSH
510 520 530 540 550
REKESELSSL VEVHETHQRD SSIHVKELEE QVESSKKLVA ELNQTLNNAE
560 570 580 590 600
EEKKVLSQKI AELSNEIKEA QNTIQELVSE SGQLKESHSV KDRDLFSLRD
610 620 630 640 650
IHETHQRESS TRVSELEAQL ESSEQRISDL TVDLKDAEEE NKAISSKNLE
660 670 680 690 700
IMDKLEQAQN TIKELMDELG ELKDRHKEKE SELSSLVKSA DQQVADMKQS
710 720 730 740 750
LDNAEEEKKM LSQRILDISN EIQEAQKTIQ EHMSESEQLK ESHGVKEREL
760 770 780 790 800
TGLRDIHETH QRESSTRLSE LETQLKLLEQ RVVDLSASLN AAEEEKKSLS
810 820 830 840 850
SMILEITDEL KQAQSKVQEL VTELAESKDT LTQKENELSS FVEVHEAHKR
860 870 880 890 900
DSSSQVKELE ARVESAEEQV KELNQNLNSS EEEKKILSQQ ISEMSIKIKR
910 920 930 940 950
AESTIQELSS ESERLKGSHA EKDNELFSLR DIHETHQREL STQLRGLEAQ
960 970 980 990 1000
LESSEHRVLE LSESLKAAEE ESRTMSTKIS ETSDELERTQ IMVQELTADS
1010 1020 1030 1040 1050
SKLKEQLAEK ESKLFLLTEK DSKSQVQIKE LEATVATLEL ELESVRARII
1060 1070 1080 1090 1100
DLETEIASKT TVVEQLEAQN REMVARISEL EKTMEERGTE LSALTQKLED
1110 1120 1130 1140 1150
NDKQSSSSIE TLTAEIDGLR AELDSMSVQK EEVEKQMVCK SEEASVKIKR
1160 1170 1180 1190 1200
LDDEVNGLRQ QVASLDSQRA ELEIQLEKKS EEISEYLSQI TNLKEEIINK
1210 1220 1230 1240 1250
VKVHESILEE INGLSEKIKG RELELETLGK QRSELDEELR TKKEENVQMH
1260 1270 1280 1290 1300
DKINVASSEI MALTELINNL KNELDSLQVQ KSETEAELER EKQEKSELSN
1310 1320 1330 1340 1350
QITDVQKALV EQEAAYNTLE EEHKQINELF KETEATLNKV TVDYKEAQRL
1360 1370 1380 1390 1400
LEERGKEVTS RDSTIGVHEE TMESLRNELE MKGDEIETLM EKISNIEVKL
1410 1420 1430 1440 1450
RLSNQKLRVT EQVLTEKEEA FRKEEAKHLE EQALLEKNLT MTHETYRGMI
1460 1470 1480 1490 1500
KEIADKVNIT VDGFQSMSEK LTEKQGRYEK TVMEASKILW TATNWVIERN
1510 1520 1530 1540 1550
HEKEKMNKEI EKKDEEIKKL GGKVREDEKE KEMMKETLMG LGEEKREAIR
1560 1570 1580
QLCVWIDHHR SRCEYLEEVL SKTVVARGQR RVSQRT
Length:1,586
Mass (Da):181,978
Last modified:June 28, 2011 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iFD6D862810164550
GO

<p>This subsection of the 'Sequence' section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAC49006 differs from that shown. Reason: Erroneous initiation. Truncated N-terminus.Curated
The sequence BAB10654 differs from that shown. Reason: Erroneous gene model prediction.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti496L → K in AAC49006 (PubMed:7753789).Curated1
Sequence conflicti562E → Q in AAC49006 (PubMed:7753789).Curated1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AB016871 Genomic DNA Translation: BAB10654.1 Sequence problems.
CP002688 Genomic DNA Translation: AED94729.1
CP002688 Genomic DNA Translation: ANM68798.1
U20810 mRNA Translation: AAC49006.1 Different initiation.

NCBI Reference Sequences

More...
RefSeqi
NP_001330520.1, NM_001344421.1
NP_198994.2, NM_123544.3

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT5G41790.1; AT5G41790.1; AT5G41790
AT5G41790.2; AT5G41790.2; AT5G41790

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
834184

Gramene; a comparative resource for plants

More...
Gramenei
AT5G41790.1; AT5G41790.1; AT5G41790
AT5G41790.2; AT5G41790.2; AT5G41790

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ath:AT5G41790

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB016871 Genomic DNA Translation: BAB10654.1 Sequence problems.
CP002688 Genomic DNA Translation: AED94729.1
CP002688 Genomic DNA Translation: ANM68798.1
U20810 mRNA Translation: AAC49006.1 Different initiation.
RefSeqiNP_001330520.1, NM_001344421.1
NP_198994.2, NM_123544.3

3D structure databases

SMRiF4JZY1
ModBaseiSearch...

Protein-protein interaction databases

IntActiF4JZY1, 1 interactor
STRINGi3702.AT5G41790.1

PTM databases

iPTMnetiF4JZY1

Proteomic databases

PaxDbiF4JZY1
PRIDEiF4JZY1
ProteomicsDBi246946

Genome annotation databases

EnsemblPlantsiAT5G41790.1; AT5G41790.1; AT5G41790
AT5G41790.2; AT5G41790.2; AT5G41790
GeneIDi834184
GrameneiAT5G41790.1; AT5G41790.1; AT5G41790
AT5G41790.2; AT5G41790.2; AT5G41790
KEGGiath:AT5G41790

Organism-specific databases

AraportiAT5G41790
TAIRilocus:2152985, AT5G41790

Phylogenomic databases

eggNOGiENOG502QWGN, Eukaryota
HOGENOMiCLU_250597_0_0_1
InParanoidiF4JZY1
OMAiNEHEATM
OrthoDBi893811at2759
PhylomeDBiF4JZY1

Miscellaneous databases

Protein Ontology

More...
PROi
PR:F4JZY1

Gene expression databases

ExpressionAtlasiF4JZY1, baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR011684, NAB
PROSITEiView protein in PROSITE
PS51774, NAB, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiCIP1_ARATH
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: F4JZY1
Secondary accession number(s): Q38843, Q9FJ35
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 25, 2017
Last sequence update: June 28, 2011
Last modified: October 7, 2020
This is version 71 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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