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Entry version 65 (08 May 2019)
Sequence version 2 (13 Apr 2016)
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Protein

SUPPRESSOR OF ABI3-5

Gene

SUA

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Splicing factor that controls alternative splicing of the developmental regulator ABI3. Reduces splicing of a cryptic intron in ABI3, leading to a decreased in ABI3-beta transcript (PubMed:20525852). Regulates the splicing of the receptor-like kinase SNC4/LRKL-2.6 (PubMed:25267732).2 Publications

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section specifies the position(s) and type(s) of zinc fingers within the protein.<p><a href='/help/zn_fing' target='_top'>More...</a></p>Zinc fingeri378 – 407RanBP2-typePROSITE-ProRule annotationAdd BLAST30

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionRNA-binding
Biological processmRNA processing, mRNA splicing
LigandMetal-binding, Zinc

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
SUPPRESSOR OF ABI3-5Imported
Alternative name(s):
REQUIRED FOR SNC4-1D protein 11 Publication
Splicing factor SUACurated
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:SUAImported
Synonyms:RSN11 Publication
Ordered Locus Names:At3g54230Imported
ORF Names:F24B22.190Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 3

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT3G54230

The Arabidopsis Information Resource

More...
TAIRi
locus:2080355 AT3G54230

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus, Spliceosome

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00004358711 – 1007SUPPRESSOR OF ABI3-5Add BLAST1007

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
F4JCU0

PRoteomics IDEntifications database

More...
PRIDEi
F4JCU0

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
F4JCU0

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the ‘Expression’ section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified ‘at protein level’. <br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Ubiquitous with highest expression in siliques toward the end of seed maturation.1 Publication

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
F4JCU0 baseline and differential

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Interacts with the pre-spliceosomal component U2AF65A.

1 Publication

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section%27">Interaction</a> section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="http://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated on a monthly basis. Each binary interaction is displayed on a separate line.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

WithEntry#Exp.IntActNotes
U2AF65AO232123EBI-4427912,EBI-4439005

Protein-protein interaction databases

Protein interaction database and analysis system

More...
IntActi
F4JCU0, 15 interactors

STRING: functional protein association networks

More...
STRINGi
3702.AT3G54230.2

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
F4JCU0

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini272 – 352RRM 1PROSITE-ProRule annotationAdd BLAST81
Domaini432 – 512RRM 2PROSITE-ProRule annotationAdd BLAST81
Domaini928 – 974G-patchPROSITE-ProRule annotationAdd BLAST47

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi749 – 835Ser-richPROSITE-ProRule annotationAdd BLAST87

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri378 – 407RanBP2-typePROSITE-ProRule annotationAdd BLAST30

Keywords - Domaini

Repeat, Zinc-finger

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG0154 Eukaryota
ENOG410YNFQ LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000029810

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
F4JCU0

KEGG Orthology (KO)

More...
KOi
K13094

Database of Orthologous Groups

More...
OrthoDBi
786674at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
F4JCU0

Family and domain databases

Conserved Domains Database

More...
CDDi
cd16166 OCRE_SUA_like, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.30.70.330, 2 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR000467 G_patch_dom
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR041591 OCRE
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
IPR035623 SUA-like_OCRE
IPR001876 Znf_RanBP2
IPR036443 Znf_RanBP2_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01585 G-patch, 1 hit
PF17780 OCRE, 1 hit
PF00076 RRM_1, 2 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00443 G_patch, 1 hit
SM00360 RRM, 2 hits
SM00547 ZnF_RBZ, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF54928 SSF54928, 2 hits
SSF90209 SSF90209, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50174 G_PATCH, 1 hit
PS50102 RRM, 2 hits
PS01358 ZF_RANBP2_1, 1 hit
PS50199 ZF_RANBP2_2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 2 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 2 described isoforms and 2 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: F4JCU0-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MDPSRYGRQQ EWDNNSAPEG YGTQHDPNHR FGVSYDDGYP DERLMRDDVY
60 70 80 90 100
NYPPGHNTLG DLPQSRKRNY EENYPSELRR QEKPYIDSNY AADYYHDSEA
110 120 130 140 150
GSRNGHYRDH EHERSSRYDG CDDYSCNDNN YRSKNYHHSR DDGREKDYDY
160 170 180 190 200
TRRSYDSEYE RASVRDGSRK SRDPQDRERN SRDREWDSRD REWDKRCYSR
210 220 230 240 250
ERDESPHKRY EKSRSRSTGR GEFSRSRSPR GRSHGRSYRE DSYEGDHWNE
260 270 280 290 300
SERRREYEDR HNQDHFSATP SATVVVKGLS MKSTEEDLYQ ILAEWGPLHH
310 320 330 340 350
VRVIREQNSG ISRGFAFIDF PTVDAARTMM DRIEHDGIVL DGRKLMFHYS
360 370 380 390 400
QPTGRAGVSR RQEHASRRSY GGSRNMIVPT DWICTICGCI NFARRTSCFQ
410 420 430 440 450
CNEPKTKDSP SADVGLSNSA AGKRISETGP THVLVVRGLD EDADEEMLRY
460 470 480 490 500
EFSKHAPIKD LRLVRDKFTH VSRGFAFVHF YSVEDATKAL EATNRTALER
510 520 530 540 550
NGKILRVAYA KSVHGSGTGI SAPSHSNNLA AAAIEAATFS QQYDGVGWAP
560 570 580 590 600
KEYNTGEKQN TGGQAQGVGE IESQKGTSAP QSGYVWDEAS GYYYDAASGY
610 620 630 640 650
YYDGNSGLYY DSNSGLWYSY DQQTQQYVPC PDQNNESKVT ENQPDSAKKE
660 670 680 690 700
KSSQQKVIIS AATTPNVEKV LSLPDAVQAA AAAAIASEKR EKERVKEIKL
710 720 730 740 750
ASKTSLLASK KKMSNVLTMW KQRSHETQIQ RPSPSLGDNP PTVSAEARSS
760 770 780 790 800
FSTGQSMGKL KSDVIIAKER STSNHGVSAL TTAESSSSST TGGTLMGVMR
810 820 830 840 850
GSFGGTLGGA SSSASVQMPP ILPSASPASV SVSGSGRRRF SETPTAGPTH
860 870 880 890 900
REQPQTSYRD RAAERRNLYG SSTSSGNDVI DSSEDLMGLR KGSSDPTPFP
910 920 930 940 950
PGVGGRGITT STEVSSFDVI TEERAIDESN VGNRMLRNMG WHEGSGLGKD
960 970 980 990 1000
GSGMKEPVQA QGVDRRAGLG SQQKKVDAEF EVQPGDTYRT LLHKKALARF

RDMSDNN
Length:1,007
Mass (Da):112,567
Last modified:April 13, 2016 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i63CE1EBCA8CF91B8
GO
Isoform 2 (identifier: F4JCU0-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     350-350: S → SS

Show »
Length:1,008
Mass (Da):112,654
Checksum:iE9A9B1F7CADB8F3A
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1I9LMI4A0A1I9LMI4_ARATH
Suppressor of abi3-5
SUA suppressor of abi3-5, At3g54230
963Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A1I9LMI6A0A1I9LMI6_ARATH
Suppressor of abi3-5
SUA suppressor of abi3-5, At3g54230
727Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence CAB70997 differs from that shown. Reason: Erroneous gene model prediction.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti262N → D in ADE44117 (PubMed:20525852).Curated1
Sequence conflicti495R → G in ADE44117 (PubMed:20525852).Curated1
Sequence conflicti508A → S in ADE44117 (PubMed:20525852).Curated1
Sequence conflicti889L → F in ADE44117 (PubMed:20525852).Curated1
Sequence conflicti920I → F in ADE44117 (PubMed:20525852).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_058194350S → SS in isoform 2. 1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
GU735482 mRNA Translation: ADE44117.1
AL132957 Genomic DNA Translation: CAB70997.1 Sequence problems.
CP002686 Genomic DNA Translation: AEE79201.1
CP002686 Genomic DNA Translation: AEE79202.1
CP002686 Genomic DNA Translation: ANM63793.1
AY070066 mRNA Translation: AAL49823.1
AY096433 mRNA Translation: AAM20073.1

Protein sequence database of the Protein Information Resource

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PIRi
T47582

NCBI Reference Sequences

More...
RefSeqi
NP_001190084.1, NM_001203155.1 [F4JCU0-2]
NP_001325864.1, NM_001339655.1 [F4JCU0-1]
NP_190991.2, NM_115283.3 [F4JCU0-1]

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT3G54230.1; AT3G54230.1; AT3G54230 [F4JCU0-1]
AT3G54230.2; AT3G54230.2; AT3G54230 [F4JCU0-2]
AT3G54230.5; AT3G54230.5; AT3G54230 [F4JCU0-1]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
824590

Gramene; a comparative resource for plants

More...
Gramenei
AT3G54230.1; AT3G54230.1; AT3G54230 [F4JCU0-1]
AT3G54230.2; AT3G54230.2; AT3G54230 [F4JCU0-2]
AT3G54230.5; AT3G54230.5; AT3G54230 [F4JCU0-1]

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ath:AT3G54230

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GU735482 mRNA Translation: ADE44117.1
AL132957 Genomic DNA Translation: CAB70997.1 Sequence problems.
CP002686 Genomic DNA Translation: AEE79201.1
CP002686 Genomic DNA Translation: AEE79202.1
CP002686 Genomic DNA Translation: ANM63793.1
AY070066 mRNA Translation: AAL49823.1
AY096433 mRNA Translation: AAM20073.1
PIRiT47582
RefSeqiNP_001190084.1, NM_001203155.1 [F4JCU0-2]
NP_001325864.1, NM_001339655.1 [F4JCU0-1]
NP_190991.2, NM_115283.3 [F4JCU0-1]

3D structure databases

SMRiF4JCU0
ModBaseiSearch...

Protein-protein interaction databases

IntActiF4JCU0, 15 interactors
STRINGi3702.AT3G54230.2

PTM databases

iPTMnetiF4JCU0

Proteomic databases

PaxDbiF4JCU0
PRIDEiF4JCU0

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT3G54230.1; AT3G54230.1; AT3G54230 [F4JCU0-1]
AT3G54230.2; AT3G54230.2; AT3G54230 [F4JCU0-2]
AT3G54230.5; AT3G54230.5; AT3G54230 [F4JCU0-1]
GeneIDi824590
GrameneiAT3G54230.1; AT3G54230.1; AT3G54230 [F4JCU0-1]
AT3G54230.2; AT3G54230.2; AT3G54230 [F4JCU0-2]
AT3G54230.5; AT3G54230.5; AT3G54230 [F4JCU0-1]
KEGGiath:AT3G54230

Organism-specific databases

AraportiAT3G54230
TAIRilocus:2080355 AT3G54230

Phylogenomic databases

eggNOGiKOG0154 Eukaryota
ENOG410YNFQ LUCA
HOGENOMiHOG000029810
InParanoidiF4JCU0
KOiK13094
OrthoDBi786674at2759
PhylomeDBiF4JCU0

Miscellaneous databases

Protein Ontology

More...
PROi
PR:F4JCU0

Gene expression databases

ExpressionAtlasiF4JCU0 baseline and differential

Family and domain databases

CDDicd16166 OCRE_SUA_like, 1 hit
Gene3Di3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR000467 G_patch_dom
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR041591 OCRE
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
IPR035623 SUA-like_OCRE
IPR001876 Znf_RanBP2
IPR036443 Znf_RanBP2_sf
PfamiView protein in Pfam
PF01585 G-patch, 1 hit
PF17780 OCRE, 1 hit
PF00076 RRM_1, 2 hits
SMARTiView protein in SMART
SM00443 G_patch, 1 hit
SM00360 RRM, 2 hits
SM00547 ZnF_RBZ, 1 hit
SUPFAMiSSF54928 SSF54928, 2 hits
SSF90209 SSF90209, 1 hit
PROSITEiView protein in PROSITE
PS50174 G_PATCH, 1 hit
PS50102 RRM, 2 hits
PS01358 ZF_RANBP2_1, 1 hit
PS50199 ZF_RANBP2_2, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiSUA_ARATH
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: F4JCU0
Secondary accession number(s): D5L2Y2, Q8VYR8, Q9M383
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 13, 2016
Last sequence update: April 13, 2016
Last modified: May 8, 2019
This is version 65 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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