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Protein
Submitted name:

VACUOLAR SORTING RECEPTOR 2

Gene

VSR2

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionReceptorImported

Names & Taxonomyi

Protein namesi
Submitted name:
VACUOLAR SORTING RECEPTOR 2Imported
Gene namesi
Name:VSR2Imported
Synonyms:AtVSR2Imported, binding protein of 80 kDa 1:2Imported, BP80-1:2Imported, VACUOLAR SORTING RECEPTOR 1:2Imported, VACUOLAR SORTING RECEPTOR 2Imported, VSR1:2Imported
Ordered Locus Names:At2g30290Imported
ORF Names:T9D9.10Imported, T9D9_10Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

AraportiAT2G30290
TAIRilocus:2065724 AT2G30290

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei566 – 589HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_500331145124 – 641Sequence analysisAdd BLAST618

Keywords - PTMi

Disulfide bondSAAS annotation

Expressioni

Gene expression databases

ExpressionAtlasiF4IMR9 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliF4IMR9
SMRiF4IMR9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini516 – 558EGF_CAInterPro annotationAdd BLAST43

Keywords - Domaini

EGF-like domainSAAS annotation, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410JXEQ Eukaryota
ENOG411041H LUCA
OMAiTVGWSFL
OrthoDBiEOG093604C2

Family and domain databases

InterProiView protein in InterPro
IPR001881 EGF-like_Ca-bd_dom
IPR018097 EGF_Ca-bd_CS
IPR003137 PA_domain
PfamiView protein in Pfam
PF02225 PA, 1 hit
SMARTiView protein in SMART
SM00179 EGF_CA, 1 hit
PROSITEiView protein in PROSITE
PS01187 EGF_CA, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

F4IMR9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRTTNVWLVV IVWVTVGWSS CTGRFVVEKN NLRVTSPESI RGVYECALGN
60 70 80 90 100
FGVPQYGGSM SGAVVYPKTN QKACKNFDDF EISFRSRVAG LPTFVLVDRG
110 120 130 140 150
DCYFTLKAWN AQRAGAATIL VADNRPEQLI TMDAPEDETS DADYLQNITI
160 170 180 190 200
PSALVSRSLG SAIKTAIAHG DPVHISLDWR EALPHPNDRV AYELWTNSND
210 220 230 240 250
ECGSKCDAQI RFLKRFKGAA QILEKGGYTR FTPHYITWYC PEAFLASRQC
260 270 280 290 300
KTQCINGGRY CAPDPEQDFS RGYNGKDVII QNLRQACFFR VTNESGKPWL
310 320 330 340 350
WWDYVTDFAI RCPMKEEKYN KKCADQVIQS LGVDVKKIDK CIGDIDANAE
360 370 380 390 400
NPVLKEEQVA QVGKGSRGDV TILPTIVINN RQYRGKLQRS AVLKALCSGF
410 420 430 440 450
RETTEPPICL TEDIETNECL QNNGGCWEDK TTNITACRDT FRGRVCQCPI
460 470 480 490 500
VQGVKFLGDG YTHCEASGAL RCGINNGGCW KQTQMGKTYS ACRDDHSKGC
510 520 530 540 550
KCPPGFIGDG LKECKDVNEC EEKTACQCRD CKCKNTWGSY ECSCSGSLLY
560 570 580 590 600
IREHDICINR DARGDFSWGV IWIIIMGLGA AALGAYTVYK YRIRTYMDSE
610 620 630 640
IRAIMAQYMP LDNNPNTQLS SQLELENAKY VESDFNLFLL S
Length:641
Mass (Da):71,746
Last modified:June 28, 2011 - v1
Checksum:iA063BCA34AD80755
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
O22925VSR2_ARATH
Vacuolar-sorting receptor 2
VSR2 BP80C, ELP4, At2g30290, T9D9.10
625Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002685 Genomic DNA Translation: AEC08367.1
RefSeqiNP_001189637.1, NM_001202708.1
UniGeneiAt.52975

Genome annotation databases

EnsemblPlantsiAT2G30290.2; AT2G30290.2; AT2G30290
GeneIDi817579
GrameneiAT2G30290.2; AT2G30290.2; AT2G30290

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002685 Genomic DNA Translation: AEC08367.1
RefSeqiNP_001189637.1, NM_001202708.1
UniGeneiAt.52975

3D structure databases

ProteinModelPortaliF4IMR9
SMRiF4IMR9
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT2G30290.2; AT2G30290.2; AT2G30290
GeneIDi817579
GrameneiAT2G30290.2; AT2G30290.2; AT2G30290

Organism-specific databases

AraportiAT2G30290
TAIRilocus:2065724 AT2G30290

Phylogenomic databases

eggNOGiENOG410JXEQ Eukaryota
ENOG411041H LUCA
OMAiTVGWSFL
OrthoDBiEOG093604C2

Gene expression databases

ExpressionAtlasiF4IMR9 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR001881 EGF-like_Ca-bd_dom
IPR018097 EGF_Ca-bd_CS
IPR003137 PA_domain
PfamiView protein in Pfam
PF02225 PA, 1 hit
SMARTiView protein in SMART
SM00179 EGF_CA, 1 hit
PROSITEiView protein in PROSITE
PS01187 EGF_CA, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiF4IMR9_ARATH
AccessioniPrimary (citable) accession number: F4IMR9
Entry historyiIntegrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: October 10, 2018
This is version 58 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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