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Protein
Submitted name:

Integrase-type DNA-binding superfamily protein

Gene

ERF73

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi75 – 132AP2/ERFPROSITE-ProRule annotationAdd BLAST58

GO - Molecular functioni

  • DNA binding Source: UniProtKB-UniRule
  • DNA-binding transcription factor activity Source: TAIR

GO - Biological processi

  • cellular response to ethylene stimulus Source: TAIR
  • cellular response to hypoxia Source: TAIR
  • ethylene-activated signaling pathway Source: TAIR
  • regulation of transcription, DNA-templated Source: TAIR
  • response to anoxia Source: TAIR
  • response to ethylene Source: TAIR
  • response to hypoxia Source: TAIR
  • transcription, DNA-templated Source: UniProtKB-UniRule

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotationImported
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Integrase-type DNA-binding superfamily proteinImported
Gene namesi
Name:ERF73Imported
Synonyms:AtERF73Imported, ethylene response factor 73Imported, HRE1Imported
Ordered Locus Names:At1g72360Imported
ORF Names:T10D10.17Imported, T10D10_17Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G72360
TAIRilocus:2194007 AT1G72360

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Expressioni

Gene expression databases

ExpressionAtlasiF4IDA7 baseline and differential

Interactioni

Protein-protein interaction databases

ELMiF4IDA7

Structurei

3D structure databases

SMRiF4IDA7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini75 – 132AP2/ERFInterPro annotationAdd BLAST58

Phylogenomic databases

eggNOGiENOG410IZCZ Eukaryota
ENOG410YQNQ LUCA
OMAiLWEENNN
OrthoDBiEOG09360R96

Family and domain databases

CDDicd00018 AP2, 1 hit
Gene3Di3.30.730.10, 1 hit
InterProiView protein in InterPro
IPR001471 AP2/ERF_dom
IPR036955 AP2/ERF_dom_sf
IPR016177 DNA-bd_dom_sf
PfamiView protein in Pfam
PF00847 AP2, 1 hit
PRINTSiPR00367 ETHRSPELEMNT
SMARTiView protein in SMART
SM00380 AP2, 1 hit
SUPFAMiSSF54171 SSF54171, 1 hit
PROSITEiView protein in PROSITE
PS51032 AP2_ERF, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.iShow all

F4IDA7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MCGGAVISDY IAPEKIARSS GKSSWRSNGV FDCSIYDFDG NFDELESDEP
60 70 80 90 100
FVFSSTHKHH ASGSASDGKK KQSSRYKGIR RRPWGRWAAE IRDPIKGVRV
110 120 130 140 150
WLGTFNTAEE AARAYDLEAK RIRGAKAKLN FPNESSGKRK AKAKTVQQVE
160 170 180 190 200
ENHEADLDVA VVSSAPSSSC LDFLWEENNP DTLLIDTQWL EDIIMGDANK
210 220 230 240 250
KHEPNDSEEA NNVDASLLSE ELLAFENQTE YFSQMPFTEG NCDSSTSLSS
260
LFDGGNDMGL WS
Length:262
Mass (Da):29,094
Last modified:June 28, 2011 - v1
Checksum:i458A9FDA23C2FC54
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q8H0T5ERF73_ARATH
Ethylene-responsive transcription f...
ERF073 At1g72360, T10D10.17
211Annotation score:
B3H5K8B3H5K8_ARATH
Integrase-type DNA-binding superfam...
ERF73 AtERF73, ethylene response factor 73, HRE1, At1g72360, T10D10.17 ERF73 AtERF73, ethylene response factor 73, HRE1, At1g72360, T10D10.17, T10D10_17
260Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002684 Genomic DNA Translation: AEE35311.1
RefSeqiNP_001077812.1, NM_001084343.2
UniGeneiAt.35111
At.68119

Genome annotation databases

EnsemblPlantsiAT1G72360.2; AT1G72360.2; AT1G72360
GeneIDi843568
GrameneiAT1G72360.2; AT1G72360.2; AT1G72360

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002684 Genomic DNA Translation: AEE35311.1
RefSeqiNP_001077812.1, NM_001084343.2
UniGeneiAt.35111
At.68119

3D structure databases

SMRiF4IDA7
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

ELMiF4IDA7

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G72360.2; AT1G72360.2; AT1G72360
GeneIDi843568
GrameneiAT1G72360.2; AT1G72360.2; AT1G72360

Organism-specific databases

AraportiAT1G72360
TAIRilocus:2194007 AT1G72360

Phylogenomic databases

eggNOGiENOG410IZCZ Eukaryota
ENOG410YQNQ LUCA
OMAiLWEENNN
OrthoDBiEOG09360R96

Gene expression databases

ExpressionAtlasiF4IDA7 baseline and differential

Family and domain databases

CDDicd00018 AP2, 1 hit
Gene3Di3.30.730.10, 1 hit
InterProiView protein in InterPro
IPR001471 AP2/ERF_dom
IPR036955 AP2/ERF_dom_sf
IPR016177 DNA-bd_dom_sf
PfamiView protein in Pfam
PF00847 AP2, 1 hit
PRINTSiPR00367 ETHRSPELEMNT
SMARTiView protein in SMART
SM00380 AP2, 1 hit
SUPFAMiSSF54171 SSF54171, 1 hit
PROSITEiView protein in PROSITE
PS51032 AP2_ERF, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiF4IDA7_ARATH
AccessioniPrimary (citable) accession number: F4IDA7
Entry historyiIntegrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: September 12, 2018
This is version 58 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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