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Entry version 56 (16 Jan 2019)
Sequence version 1 (28 Jun 2011)
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Protein

BEACH domain-containing protein B

Gene

BCHB

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

May be involved in the suppression of BCHC1 activity.1 Publication

Enzyme and pathway databases

Reactome - a knowledgebase of biological pathways and processes

More...
Reactomei
R-ATH-6798695 Neutrophil degranulation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
BEACH domain-containing protein B1 Publication
Alternative name(s):
BEACH-domain homolog BCurated
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:BCHB1 Publication
Ordered Locus Names:At1g58230Imported
ORF Names:F16M22.8Imported, T18I24.16Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 1

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT1G58230

The Arabidopsis Information Resource

More...
TAIRi
locus:2015292 AT1G58230

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the ‘Pathology and Biotech’ section describes the in vivo effects caused by ablation of the gene (or one or more transcripts) coding for the protein described in the entry. This includes gene knockout and knockdown, provided experiments have been performed in the context of a whole organism or a specific tissue, and not at the single-cell level.<p><a href='/help/disruption_phenotype' target='_top'>More...</a></p>Disruption phenotypei

No visible phenotype.1 Publication

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00004340341 – 2604BEACH domain-containing protein BAdd BLAST2604

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
F4I9T0

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
F4I9T0

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
F4I9T0 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
F4I9T0 AT

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
3702.AT1G58230.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

More...
ProteinModelPortali
F4I9T0

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
F4I9T0

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini1761 – 1912BEACH-type PHPROSITE-ProRule annotationAdd BLAST152
Domaini1936 – 2226BEACHPROSITE-ProRule annotationAdd BLAST291
<p>This subsection of the ‘Family and Domains’ section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati2254 – 2293WD 1Sequence analysisAdd BLAST40
Repeati2368 – 2407WD 2Sequence analysisAdd BLAST40
Repeati2433 – 2474WD 3Sequence analysisAdd BLAST42
Repeati2476 – 2515WD 4Sequence analysisAdd BLAST40
Repeati2516 – 2557WD 5Sequence analysisAdd BLAST42
Repeati2558 – 2596WD 6Sequence analysisAdd BLAST39

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi914 – 919Poly-LeuSequence analysis6

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Repeat, WD repeat

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1787 Eukaryota
ENOG410XNQC LUCA

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
F4I9T0

Database of Orthologous Groups

More...
OrthoDBi
101142at2759

Family and domain databases

Conserved Domains Database

More...
CDDi
cd06071 Beach, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.10.1540.10, 1 hit
2.130.10.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR016024 ARM-type_fold
IPR000409 BEACH_dom
IPR036372 BEACH_dom_sf
IPR013320 ConA-like_dom_sf
IPR031570 DUF4704
IPR023362 PH-BEACH_dom
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR019775 WD40_repeat_CS
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF02138 Beach, 1 hit
PF15787 DUF4704, 1 hit
PF14844 PH_BEACH, 1 hit
PF00400 WD40, 2 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM01026 Beach, 1 hit
SM00320 WD40, 5 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48371 SSF48371, 1 hit
SSF49899 SSF49899, 1 hit
SSF50978 SSF50978, 1 hit
SSF81837 SSF81837, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50197 BEACH, 1 hit
PS51783 PH_BEACH, 1 hit
PS00678 WD_REPEATS_1, 1 hit
PS50082 WD_REPEATS_2, 1 hit
PS50294 WD_REPEATS_REGION, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

F4I9T0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MESDSVAGSA SSSDAAASHL PSVSVLLDAL EQSASTPRIA NGLSQRLLRS
60 70 80 90 100
LQFSNENKLS FKALNGACRV LRLACIQAKE SRKSGCVSPL VESSDCGVIV
110 120 130 140 150
DSPHKKSDSS HTEDCWFECV ESCVGIFTEF FSSTNDAKVY VLRSSVCVDC
160 170 180 190 200
LFELFWEKAV RNNVMKLIID LMKIRPLCEE DKSAKLQVCS KYLETFTQVK
210 220 230 240 250
ERENDSVDLS VDLLAGMRDL IKSDSRYYQA LFREGECFLH IVSLLNGNLD
260 270 280 290 300
EANGEKLVLN VLQTLTSLLA NNDTSKFAFK ALAGKGYQTL QSLLLDFFQW
310 320 330 340 350
KPTQRLLDAL LDMLVDGKFD DKGSALIKNE DVIILYLNVL QKSSESLQCY
360 370 380 390 400
GLNLFQQLLR DSISNRASCV RAGMLHLLLD WFSLENDDSV ILKITQLTQT
410 420 430 440 450
IGGHSISGKD IRKIFALLRS ERVGNQQRYR SLLLACLLSM LNEKGPTGFF
460 470 480 490 500
DMNGVESGIV IRTPVQWPAN KGFSFCCWLR VESFPGDGKM GIFSFMSKNG
510 520 530 540 550
KGCFAALGKD GLSYVSLNLK RQCVNVHTNL VCKKWHFICV SHSIGRAFWG
560 570 580 590 600
GSLLRCYVNG DLVSSERCSY PKVTDVLTSC LIGTRITLPH IQDNDGLESI
610 620 630 640 650
RDVFPFFGQI GPVYLFNDSL SSEQVQAIYS LGPSYMYAFL ENEMTCPFSD
660 670 680 690 700
NPFPSGILDG KDGLASKVSF GLNAQASDGR RLFNVSRVSD HLQERLAFEA
710 720 730 740 750
DIMVGTQLCS RRLLQQIIYC VGGISVFFPL ITQSDRCESE TLNEETSAMP
760 770 780 790 800
TKERMTAEVI ELIASVLDEN PANQQQMHLL AGFPILGFLL QSIQPKQLNL
810 820 830 840 850
ETLSSLKHLF NVISSSGFAE QLVEDAISSI FLNPHIWLHA AYNVQRELYM
860 870 880 890 900
FLIQQLDNDP RLLGSLCRLP RVIDIVWNFY WESERYCKGS KPLMHPTRTI
910 920 930 940 950
AERPSRDEIH KIRLLLLSLG EMSLRHNISS GDVKALTAFF ETCQDVACIE
960 970 980 990 1000
DVLHMVIRAI SQTSVLVSFL EQVNLIGGCH IFVDLLQRDY EPIRLLSLQF
1010 1020 1030 1040 1050
LGRLLYDVPS ERKGPKFFNL AVGRTKSLSQ GHKKIGARTQ PIFLAMSDRL
1060 1070 1080 1090 1100
FQYPQTDNLR ATLFDVLLGG ASPKQVLQKH NQVDKHRSKP SNSHFFLPQI
1110 1120 1130 1140 1150
FVFIFEFLSG CKDGLARMKI ISDILDLLDS NPMNVEALME FGWSAWLTAS
1160 1170 1180 1190 1200
MKLDVIKDYR SELLNHDDLA LNEQHFVRGL FCVVLCHYIL SVKGGWQQLE
1210 1220 1230 1240 1250
ETVNFILLQS EHNDVPYRSF LRDLYEDLIQ RLVELSSEDN IFLSHPCRDN
1260 1270 1280 1290 1300
VLYLLRLVDE MLVREFGSRL LFPAISTDFS EDLLQLGNRE DPTLGLDESF
1310 1320 1330 1340 1350
QRFLTEEISR NTECQQSCTT VTELMTNERW WNLYDNLWKI ICDINGRGPV
1360 1370 1380 1390 1400
KMSPKSLATG PSIGQRARGL VESLNVPAAE MAAVVVSGGI GSALSGKMNK
1410 1420 1430 1440 1450
NVDKAMLLRG EKCPRIVFRL VTLYLCMSSL EKATRCVQQV TSLLPSFLAA
1460 1470 1480 1490 1500
DDEQSKSRLH LFIGCLLYVR SQYGKLDDGA RFHVISHLIR ETVSCGKSIL
1510 1520 1530 1540 1550
ATSGMNKDDS SDSGGIFKEM GSIQNLIHKD RVLAAVTDET TYMKTLISDR
1560 1570 1580 1590 1600
TRQVQALGER NNETLSIECN SKKAFDGELQ NVLKTVVTWD ENRRVSVQLS
1610 1620 1630 1640 1650
HEEQQQNVTE KWIHMLRSLM DERGPWSATP FPNNILNRWK LDRTEDSWRR
1660 1670 1680 1690 1700
RPKLRRNYHF DERLCHPPST STATENETSN VINESKSGVI HIPEQMKKFL
1710 1720 1730 1740 1750
LKGIRRITDE GGSDSCENDS SQAEQSFMDT SADIQFSELV RTSSGLKDVV
1760 1770 1780 1790 1800
QDKVDASSLE VGTSEVLTSV PCVLVTPKRK LAGWLAVMKN VLHFSGEFLV
1810 1820 1830 1840 1850
EGTGGSAVFK NFSTSKGSDV TKAENKQNLV KWSSPYDSET FLDLESGNKN
1860 1870 1880 1890 1900
KKPLKKVKRH RRWKIGKVKS VHWTRYLLQY TALEIFFQES VPPVFLNFAS
1910 1920 1930 1940 1950
QKNAKEVGML IVSTRNEFLF PKNVPRDRTA MISFVDRRIA MEMAETARDR
1960 1970 1980 1990 2000
WRRREITNFE YLMILNTLAG RSYNDLTQYP VFPWVVADYS SETLDFSKAS
2010 2020 2030 2040 2050
TFRDLSKPVG ALDTRRFEIF EDRYHSFSDP DIPSFYYGSH YSSMGSVLYY
2060 2070 2080 2090 2100
LLRLEPFTSL HRSLQGGKFD HADRLFQSVE GSFRNCLSNT SDVKELIPEF
2110 2120 2130 2140 2150
FYMPEFLVNS NSYHLGVKQD GEPLGEVCLP PWAKGSPEMF IARNREALES
2160 2170 2180 2190 2200
EYVSSHLHDW IDLIFGHKQR GKPAVEAANI FYYLTYEGAV DVENMEDQLQ
2210 2220 2230 2240 2250
ISAIEDQIAN FGQTPIQIFR KKHPRRGPPI PIAHPLYFAP ASINLSSILP
2260 2270 2280 2290 2300
ATTHSPSAVL YVGVVDSNIV LVNQGLTLSV KIWLTTQLHS GGNFTFSSAQ
2310 2320 2330 2340 2350
DPFFGVGSDV LSPRNIGSPL ADNVELGSQC FAAMQMPLEN FLVSCGNWEN
2360 2370 2380 2390 2400
SFHVISLTDG RVVQSIRHHK DVVSCVAVTA DSTILATGSY DTTVMVWDIL
2410 2420 2430 2440 2450
RMRTPEKRVR NTHAEVLRKD IVIADAPSHI LCGHDDIITC LYVSTDLDIV
2460 2470 2480 2490 2500
ISGSKDGTCV FHTLREGRYI RSLKHPSGSA VSKLAASHHG RIVLYGDDDL
2510 2520 2530 2540 2550
SLHLYSINGK HLASSESNGR INCLELSKCG EFLVSAGDQG QIIVRSMNTL
2560 2570 2580 2590 2600
EVVKRYNGAG KIITSLTVTQ EECFLAGTKD GALLVYSIEN PQHRKPSPIW

SIKS
Length:2,604
Mass (Da):292,779
Last modified:June 28, 2011 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iD482E201DCD5192E
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1P8AUM6A0A1P8AUM6_ARATH
Binding protein
At1g58230, F16M22.8
2,398Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A1P8AUL9A0A1P8AUL9_ARATH
Binding protein
At1g58230, F16M22.8
2,604Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAG50767 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence AAG50953 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AC073943 Genomic DNA Translation: AAG50953.1 Sequence problems.
AC079131 Genomic DNA Translation: AAG50767.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE33518.1

Protein sequence database of the Protein Information Resource

More...
PIRi
H96615

NCBI Reference Sequences

More...
RefSeqi
NP_564728.3, NM_104604.4

UniGene gene-oriented nucleotide sequence clusters

More...
UniGenei
At.64956

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT1G58230.1; AT1G58230.1; AT1G58230

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
842191

Gramene; a comparative resource for plants

More...
Gramenei
AT1G58230.1; AT1G58230.1; AT1G58230

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ath:AT1G58230

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC073943 Genomic DNA Translation: AAG50953.1 Sequence problems.
AC079131 Genomic DNA Translation: AAG50767.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE33518.1
PIRiH96615
RefSeqiNP_564728.3, NM_104604.4
UniGeneiAt.64956

3D structure databases

ProteinModelPortaliF4I9T0
SMRiF4I9T0
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT1G58230.1

PTM databases

iPTMnetiF4I9T0

Proteomic databases

PaxDbiF4I9T0

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G58230.1; AT1G58230.1; AT1G58230
GeneIDi842191
GrameneiAT1G58230.1; AT1G58230.1; AT1G58230
KEGGiath:AT1G58230

Organism-specific databases

AraportiAT1G58230
TAIRilocus:2015292 AT1G58230

Phylogenomic databases

eggNOGiKOG1787 Eukaryota
ENOG410XNQC LUCA
InParanoidiF4I9T0
OrthoDBi101142at2759

Enzyme and pathway databases

ReactomeiR-ATH-6798695 Neutrophil degranulation

Miscellaneous databases

Protein Ontology

More...
PROi
PR:F4I9T0

Gene expression databases

ExpressionAtlasiF4I9T0 baseline and differential
GenevisibleiF4I9T0 AT

Family and domain databases

CDDicd06071 Beach, 1 hit
Gene3Di1.10.1540.10, 1 hit
2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR016024 ARM-type_fold
IPR000409 BEACH_dom
IPR036372 BEACH_dom_sf
IPR013320 ConA-like_dom_sf
IPR031570 DUF4704
IPR023362 PH-BEACH_dom
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR019775 WD40_repeat_CS
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PfamiView protein in Pfam
PF02138 Beach, 1 hit
PF15787 DUF4704, 1 hit
PF14844 PH_BEACH, 1 hit
PF00400 WD40, 2 hits
SMARTiView protein in SMART
SM01026 Beach, 1 hit
SM00320 WD40, 5 hits
SUPFAMiSSF48371 SSF48371, 1 hit
SSF49899 SSF49899, 1 hit
SSF50978 SSF50978, 1 hit
SSF81837 SSF81837, 1 hit
PROSITEiView protein in PROSITE
PS50197 BEACH, 1 hit
PS51783 PH_BEACH, 1 hit
PS00678 WD_REPEATS_1, 1 hit
PS50082 WD_REPEATS_2, 1 hit
PS50294 WD_REPEATS_REGION, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiBCHB_ARATH
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: F4I9T0
Secondary accession number(s): Q9C6Q7, Q9C728
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 14, 2015
Last sequence update: June 28, 2011
Last modified: January 16, 2019
This is version 56 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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