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Protein

Beta-arabinofuranosyltransferase RAY1

Gene

RAY1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Beta-arabinofuranosyltransferase that transfers specifically an arabinosyl residue from UDP-arabinofuranose to the monosaccharide galactose or beta-methyl-galactoside in vitro. Catalyzes the addition of a beta-arabinofuranose residue onto a beta-galactosyl residue of an Yariv-precipitable wall polymer in vivo.1 Publication

GO - Molecular functioni

  • transferase activity, transferring glycosyl groups Source: TAIR

GO - Biological processi

  • cell wall biogenesis Source: TAIR
  • cell wall organization Source: UniProtKB-KW

Keywordsi

Molecular functionGlycosyltransferase, Transferase
Biological processCell wall biogenesis/degradation

Protein family/group databases

CAZyiGT77 Glycosyltransferase Family 77

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-arabinofuranosyltransferase RAY1Curated (EC:2.4.2.-Curated)
Alternative name(s):
Protein REDUCED ARABINOSE YARIV 11 Publication
Gene namesi
Name:RAY11 Publication
Ordered Locus Names:At1g70630Imported
ORF Names:F24J13.20Imported, F5A18.19Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G70630
TAIRilocus:2026831 AT1G70630

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Pathology & Biotechi

Disruption phenotypei

Reduced growth of primary root. Delayed flowering.1 Publication

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004345361 – 537Beta-arabinofuranosyltransferase RAY1Add BLAST537

Proteomic databases

PaxDbiF4I6V0

PTM databases

iPTMnetiF4I6V0

Expressioni

Gene expression databases

ExpressionAtlasiF4I6V0 baseline and differential
GenevisibleiF4I6V0 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G70630.1

Structurei

3D structure databases

ProteinModelPortaliF4I6V0
SMRiF4I6V0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi370 – 372DXD motifCurated3

Domaini

The conserved DXD motif is involved in enzyme activity.By similarity

Sequence similaritiesi

Belongs to the glycosyltransferase 77 family.Curated

Phylogenomic databases

eggNOGiENOG410IGF5 Eukaryota
ENOG4111BGA LUCA
HOGENOMiHOG000029659
InParanoidiF4I6V0
KOiK20892
OMAiIVAWNNP
OrthoDBiEOG093601MC

Family and domain databases

InterProiView protein in InterPro
IPR005069 Nucl-diP-sugar_transferase
PfamiView protein in Pfam
PF03407 Nucleotid_trans, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 5 potential isoforms that are computationally mapped.Show allAlign All

F4I6V0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MMSRIEAYQS DIAVLMDPET VLLPDFISAL SYAHELGRDW LLVSSSVEIP
60 70 80 90 100
RFPFHWDETR HFWRQDNGKR VRFRELQKMI SLRSLQSNSS ASKMIMAWNN
110 120 130 140 150
IDMPLHCGVL PPFLYQRGTH NQWIINEAMS CKRRFVFDAT STISSFFLGN
160 170 180 190 200
AENIYNRSDN VSEPKTRNWE YVGNSHLGQL YGSLYSRSYT LPKLLKCNRR
210 220 230 240 250
YIFVSASERS TDLSIPKGKS LGFRTREKIS ACITRTKSRS LKLDFVQKDE
260 270 280 290 300
TVPPLKFPFD LESLLPLVAD KNRTVVLSVA GYSYKDMLMS WVCRLRRLKV
310 320 330 340 350
PNFLVCALDD ETYQFSILQG LPVFFDPYAP KNISFNDCHF GSKCFQRVTK
360 370 380 390 400
VKSRTVLKIL KLGYNVLLSD VDVYWFRNPL PLLQSFGPSV LAAQSDEYNT
410 420 430 440 450
TAPINRPRRL NSGFYFARSD SPTIAAMEKV VKHAATSGLS EQPSFYDTLC
460 470 480 490 500
GEGGAYRLGD DRCVEPETNL TVQFLDRELF PNGAYGDLWL KEDVRAECEK
510 520 530
KHCFVLHNNW ISGRLKKLER QMMKGLWEYD ASMRMCV
Length:537
Mass (Da):61,922
Last modified:June 28, 2011 - v1
Checksum:i57D84CE2B6AF2D55
GO

Computationally mapped potential isoform sequencesi

There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1P8ASW5A0A1P8ASW5_ARATH
Glycosyltransferase
RAY1 REDUCED ARABINOSE YARIV 1, At1g70630, F24J13.20, F24J13_20
506Annotation score:
A0A1P8ASZ1A0A1P8ASZ1_ARATH
Nucleotide-diphospho-sugar transfer...
RAY1 REDUCED ARABINOSE YARIV 1, At1g70630, F24J13.20, F24J13_20
722Annotation score:
A0A1P8ASV0A0A1P8ASV0_ARATH
Nucleotide-diphospho-sugar transfer...
RAY1 REDUCED ARABINOSE YARIV 1, At1g70630, F24J13.20, F24J13_20
753Annotation score:
A0A1P8AT04A0A1P8AT04_ARATH
Nucleotide-diphospho-sugar transfer...
RAY1 REDUCED ARABINOSE YARIV 1, At1g70630, F24J13.20, F24J13_20
743Annotation score:
A0A1P8ASW3A0A1P8ASW3_ARATH
Nucleotide-diphospho-sugar transfer...
RAY1 REDUCED ARABINOSE YARIV 1, At1g70630, F24J13.20, F24J13_20
674Annotation score:

Sequence cautioni

The sequence AAG52325 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence AAG52475 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KJ138944 mRNA Translation: AHL38884.1
AC010796 Genomic DNA Translation: AAG52475.1 Sequence problems.
AC011663 Genomic DNA Translation: AAG52325.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE35092.1
CP002684 Genomic DNA Translation: ANM59749.1
PIRiE96730
RefSeqiNP_001322086.1, NM_001334470.1
NP_177220.2, NM_105731.4
UniGeneiAt.50024

Genome annotation databases

EnsemblPlantsiAT1G70630.1; AT1G70630.1; AT1G70630
AT1G70630.2; AT1G70630.2; AT1G70630
GeneIDi843400
GrameneiAT1G70630.1; AT1G70630.1; AT1G70630
AT1G70630.2; AT1G70630.2; AT1G70630
KEGGiath:AT1G70630

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KJ138944 mRNA Translation: AHL38884.1
AC010796 Genomic DNA Translation: AAG52475.1 Sequence problems.
AC011663 Genomic DNA Translation: AAG52325.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE35092.1
CP002684 Genomic DNA Translation: ANM59749.1
PIRiE96730
RefSeqiNP_001322086.1, NM_001334470.1
NP_177220.2, NM_105731.4
UniGeneiAt.50024

3D structure databases

ProteinModelPortaliF4I6V0
SMRiF4I6V0
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT1G70630.1

Protein family/group databases

CAZyiGT77 Glycosyltransferase Family 77

PTM databases

iPTMnetiF4I6V0

Proteomic databases

PaxDbiF4I6V0

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G70630.1; AT1G70630.1; AT1G70630
AT1G70630.2; AT1G70630.2; AT1G70630
GeneIDi843400
GrameneiAT1G70630.1; AT1G70630.1; AT1G70630
AT1G70630.2; AT1G70630.2; AT1G70630
KEGGiath:AT1G70630

Organism-specific databases

AraportiAT1G70630
TAIRilocus:2026831 AT1G70630

Phylogenomic databases

eggNOGiENOG410IGF5 Eukaryota
ENOG4111BGA LUCA
HOGENOMiHOG000029659
InParanoidiF4I6V0
KOiK20892
OMAiIVAWNNP
OrthoDBiEOG093601MC

Miscellaneous databases

PROiPR:F4I6V0

Gene expression databases

ExpressionAtlasiF4I6V0 baseline and differential
GenevisibleiF4I6V0 AT

Family and domain databases

InterProiView protein in InterPro
IPR005069 Nucl-diP-sugar_transferase
PfamiView protein in Pfam
PF03407 Nucleotid_trans, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRAY1_ARATH
AccessioniPrimary (citable) accession number: F4I6V0
Secondary accession number(s): Q9S7C7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 14, 2015
Last sequence update: June 28, 2011
Last modified: October 10, 2018
This is version 54 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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Main funding by: National Institutes of Health

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