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Entry version 21 (26 Feb 2020)
Sequence version 1 (31 May 2011)
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Protein
Submitted name:

Uncharacterized protein

Gene

HMPREF0059_01140

Organism
Actinomyces viscosus C505
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:HMPREF0059_01140Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiActinomyces viscosus C505Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri562973 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaActinobacteriaActinomycetalesActinomycetaceaeActinomyces
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000004668 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 75DisorderedSequence analysisAdd BLAST75
Regioni86 – 105DisorderedSequence analysisAdd BLAST20
Regioni119 – 189DisorderedSequence analysisAdd BLAST71
Regioni261 – 309DisorderedSequence analysisAdd BLAST49

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi8 – 22PolyampholyteSequence analysisAdd BLAST15
Compositional biasi171 – 188BasicSequence analysisAdd BLAST18
Compositional biasi266 – 281PolarSequence analysisAdd BLAST16
Compositional biasi282 – 309Pro-richSequence analysisAdd BLAST28

Phylogenomic databases

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_008883_0_0_11

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

F2UYI5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAAPHHHRPQ VPPDRRSDRH PAPAPAGPRA QLGLPGPGRL RVRGRGHGAQ
60 70 80 90 100
LLGRGTPPGG PGLRHGGGDP AGEHPAARVL ARHRRRLPGH PHPRTGGGAH
110 120 130 140 150
VLGDPHRLRR PYRLLPGALP ERADHAGPGR HLLRRRRLRT GGGRRLGLDG
160 170 180 190 200
NGAPGGPDPV RLPAHHARHQ PQPPHPVRRR RRGRGGHRLG QPARALHVRA
210 220 230 240 250
ALHPDAPAAA AGPGRHAARG ALGLLHLRAG VLSSRTGGLR DEHCMDRLLA
260 270 280 290 300
VRPLERFPPM TQPVLSRAGA SPSQQPQPQP VSAVTPGEPI PSAPTSAVPA
310 320 330 340 350
PVPAPEPEPP ALAQPAVALP TLVRLGGLPV RAVPETSAAV IGTLDYLRRL
360 370 380 390 400
DEVLDGAADQ LLDPLYEIVP TLDKAERRPV LRAKRCVFQG RATDLSEEVL
410 420 430 440 450
AALPAELRAL LERWDALVAR KEETRARLAV LVDVDLDRSR ELLAAGLDEP
460 470 480 490 500
GYQEALAIAA PALVSTLAAR GRRLEDPRVL RTLYTLATRA ALKTSPFSGL
510 520 530 540 550
TTVNEAGQPS SGRSHRMVAT HLAYRILSAT AQDLAADGAL YLEPAPVRRS
560 570 580 590 600
YSAAPGPDMA GAYGQYPSRE VEAEALTVVG EHEYGNGMVF RQETIQPARW
610 620 630 640 650
LQETHDALTG GGMHAVLSVR DACERVGGAD PRLRLERMLA SGAIVPHVPW
660 670 680 690 700
YRGENPFPLL AASLSPEQQR QWGKDLAWLA RLDDAVGAAD GPGRAELLNR
710 720 730 740 750
TVRLAERVFP DGELGERPSG FLYEDRESTR SWVDPLEDAP FEQDVKTLGE
760 770 780 790 800
LADPWVARSH IYDLMVARFV SLFGNGGVCK DPLAFFMTIA HAPDGDQEML
810 820 830 840 850
RAAGLDYAAG PNEERAALSG GLSGSPRHLG AFLQPVAPSA RTYAAGGGLT
860 870 880 890 900
VVNAFTNANG SLQARFHRLL GSGFRERLAT RIRTSWGTER VLEIQASTEC
910 920 930 940 950
NTGQAVSCGL LPPLGLPGEP GAPEAVPLSS LRLVHDPATS TLFLADDAGP
960 970 980 990 1000
VGLAYLGLTP QYLLGGYLSW LVLLSDPWSR LPPFADHWTS RRRDLNGPLP
1010 1020 1030 1040 1050
DEVMHSERTV AGRLVTRRES WTFPAHQIAP LMDRDLTTTL LHMDDLRKQW
1060 1070 1080 1090 1100
GIPTEVFVHQ HMPSQGATFD QHKPRYVDLT SPVSLLALRG WIDPGAAHIS
1110 1120 1130
FVEALPARGE ALGLTQDGEP TVAEYLVGLQ WPKNLGGMA
Length:1,139
Mass (Da):122,598
Last modified:May 31, 2011 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iFEEE2E7272141A29
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
ACRE02000065 Genomic DNA Translation: EGE38286.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
EGE38286; EGE38286; HMPREF0059_01140

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ACRE02000065 Genomic DNA Translation: EGE38286.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblBacteriaiEGE38286; EGE38286; HMPREF0059_01140

Phylogenomic databases

HOGENOMiCLU_008883_0_0_11

Family and domain databases

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiF2UYI5_ACTVI
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: F2UYI5
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: February 26, 2020
This is version 21 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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