Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Nucleolar snRNP protein

Gene

sof1

Organism
Cryptomonas paramecium
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Nucleolar snRNP proteinImported
Gene namesi
Name:sof1Imported
ORF Names:CPARA_1gp166Imported
Encoded oniNucleomorphImported
OrganismiCryptomonas parameciumImported
Taxonomic identifieri2898 [NCBI]
Taxonomic lineageiEukaryotaCryptophytaCryptomonadalesCryptomonadaceaeCryptomonas

Subcellular locationi

Keywords - Cellular componenti

NucleomorphImported

Structurei

3D structure databases

ProteinModelPortaliF2HHM8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini37 – 333WD_REPEATS_REGIONInterPro annotationAdd BLAST297
Repeati80 – 121WDPROSITE-ProRule annotationAdd BLAST42
Repeati249 – 279WDPROSITE-ProRule annotationAdd BLAST31
Repeati292 – 324WDPROSITE-ProRule annotationAdd BLAST33

Keywords - Domaini

WD repeatPROSITE-ProRule annotation

Family and domain databases

Gene3Di2.130.10.10, 2 hits
InterProiView protein in InterPro
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PfamiView protein in Pfam
PF00400 WD40, 3 hits
SMARTiView protein in SMART
SM00320 WD40, 5 hits
SUPFAMiSSF50978 SSF50978, 1 hit
PROSITEiView protein in PROSITE
PS50082 WD_REPEATS_2, 3 hits
PS50294 WD_REPEATS_REGION, 1 hit

Sequencei

Sequence statusi: Complete.

F2HHM8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEPRDFIRHE KLKLSYCKNK LSKKNTKFTK DCSIKIFSGN TESISCIKRH
60 70 80 90 100
SRCSSLFFSG DSRGNIEAWS LFTRKRVRYV KAHSDVIKDL AINYKGTTLV
110 120 130 140 150
SCSADRFLKI WSIDETAFTN KNYFRNQLDV TSLSAHPMCD FFLTTGTRTF
160 170 180 190 200
LWDLNKLQPI RRLYNKMGLV SKATFNPFEF NIASCCAEDR SVFLCDLRLN
210 220 230 240 250
HHVKKFFFNM SNNDISWSYV YPSQFTVANE DGNLYSFDIR NFSKIYRTFK
260 270 280 290 300
GHFMPVTTLS RSPAGHLVAS GSFDNTIRLS SDKLLSFSQT LFVPEMKKVY
310 320 330 340 350
NIFLSLDSKC LVSASEDGTL RLWKNFEQNA RVYASFFKKS FFKKKRNDKL
360 370 380 390
CLFSLYSHCP IYTRAKVNRH KKNSSVSEFL LPAYINFKLK KFN
Length:393
Mass (Da):45,796
Last modified:May 31, 2011 - v1
Checksum:i3B7588B0DA145DEA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002172 Genomic DNA Translation: AEA38824.1
RefSeqiXP_003239722.1, XM_003239674.1

Genome annotation databases

EnsemblProtistsiAEA38824; AEA38824; CPARA_1gp166
GeneIDi10446978

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002172 Genomic DNA Translation: AEA38824.1
RefSeqiXP_003239722.1, XM_003239674.1

3D structure databases

ProteinModelPortaliF2HHM8
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiAEA38824; AEA38824; CPARA_1gp166
GeneIDi10446978

Family and domain databases

Gene3Di2.130.10.10, 2 hits
InterProiView protein in InterPro
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PfamiView protein in Pfam
PF00400 WD40, 3 hits
SMARTiView protein in SMART
SM00320 WD40, 5 hits
SUPFAMiSSF50978 SSF50978, 1 hit
PROSITEiView protein in PROSITE
PS50082 WD_REPEATS_2, 3 hits
PS50294 WD_REPEATS_REGION, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiF2HHM8_9CRYP
AccessioniPrimary (citable) accession number: F2HHM8
Entry historyiIntegrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: November 22, 2017
This is version 27 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again