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Protein
Submitted name:

Predicted protein

Gene
N/A
Organism
Hordeum vulgare subsp. vulgare (Domesticated barley)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Predicted proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHordeum vulgare subsp. vulgare (Domesticated barley)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri112509 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticodaeTriticeaeHordeinaeHordeum
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000011116 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

PRoteomics IDEntifications database

More...
PRIDEi
F2D0I0

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
4513.MLOC_70787.1

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati664 – 702HEATPROSITE-ProRule annotationAdd BLAST39
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini861 – 1095TOGInterPro annotationAdd BLAST235

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili1 – 24Sequence analysisAdd BLAST24
Coiled coili160 – 188Sequence analysisAdd BLAST29

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

Database of Orthologous Groups

More...
OrthoDBi
EOG093600JF

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.25.10.10, 2 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR021133 HEAT_type_2
IPR015016 SF3b_su1
IPR038737 SF3b_su1-like
IPR034085 TOG

The PANTHER Classification System

More...
PANTHERi
PTHR12097 PTHR12097, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF08920 SF3b1, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM01349 TOG, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48371 SSF48371, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50077 HEAT_REPEAT, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All

F2D0I0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDGIDAELAR AQDERRKLEE ALAAGAPMAV SSVTFDKDLY GGGGSGSDRF
60 70 80 90 100
AGYDTSIPAS EDDAPEDDGA EPTATNPAVR RLASYTGHAV AAADIPRSED
110 120 130 140 150
DDGMPAKRSQ RIIDREDDYR RRRLDRIISP QRHDAFASGE ATPDPSVRTY
160 170 180 190 200
ADAMRESKVQ QEKEHVLREI AKKRKEEEEE KAKEKKAAPQ PQPAATKRRN
210 220 230 240 250
RWDQSQDGDA AAGAKKSKTS DWDAPDATPG IGRWDATPGR VGDATPSVRR
260 270 280 290 300
NRWDETPTPG RMADADATPA AGGITPGATP SGAWDATPKL PGGLVTPTPK
310 320 330 340 350
KQRSRWDETP ASMGSATPGG TAATPAGFNT PGQTPFGAEN LATPTPGHLA
360 370 380 390 400
ARGPMTPEQY QLLRWERDIE ERNRPLTDEE LDSMFPQEGY KILEPPASYQ
410 420 430 440 450
PIRTPARKLL ATPTPLGTPM YAIPEENRGQ QFDVPKDLGP GLPLMKPEDY
460 470 480 490 500
QYFGTLLNED EEEQLTPEEQ KERKIMKLLL KVKNGTPPQR KTALRQLTDK
510 520 530 540 550
AREFGAGPLF NKILPLLMQP TLEDQERHLL VKVIDRVLYK LDELVRPFVH
560 570 580 590 600
KILVVIEPLL IDEDYYARVE GREIISNLSK AAGLATMIAA MRPDIDNIDE
610 620 630 640 650
YVRNTTARAF SVVASALGIP ALLPFLKAVC QSKKSWQARH TGIKIVQQIA
660 670 680 690 700
ILMGCAVLPH LKNLVEIIEH GLSDENQKVR TITALSLAAL AEAAAPYGIE
710 720 730 740 750
SFDSVLKPLW KGIRSHRGKV LAAFLKAIGF IIPLMDALYA SYYTKEVMQV
760 770 780 790 800
LIREFQSPDE EMKKIVLKVV KQCVSTEGVE ADYIRSDILP DFFKHFWVRR
810 820 830 840 850
MALDRRNYKQ LVETTVEMAN KVGVTGIVGK IVEDLKDESE PYRRMVMETI
860 870 880 890 900
EKVVANLGAS DIDPRLEELL IDGILYAFQE QTSDDANVML NGFGAVVNAL
910 920 930 940 950
GQRVKPYLPQ ICGTIKWRLN NKSAKVRQQA ADLISRIAIV MKQCQEEQLM
960 970 980 990 1000
GHLGVVLYEY LGEEYPEVLG SILGALKAIV NVIGMTKMTP PIKDLLPRLT
1010 1020 1030 1040 1050
PILKNRHEKV QENCIDLVGR IADRGAEFVP AREWMRICFE LLEMLKAHKK
1060 1070 1080 1090 1100
GIRRATVNTF GYIAKAIGPQ DVLATLLNNL KVQERQNRVC TTVAIAIVAE
1110 1120 1130 1140 1150
TCSPFTVLPA LMNEYRVPEL NVQNGVLKSL SFLFEYIGEM GKDYIYAVTP
1160 1170 1180 1190 1200
LLEDALMDRD LVHRQTAASA VKHMALGVAG LGCEDALVHL LNYIWPNIFE
1210 1220 1230 1240 1250
TSPHVINAVM EAIEGMRVAL GAAVVLNYCL QGLFHPARKV REVYWKIYNS
1260 1270 1280
LYIGAQDALV ASYPALGDDG DNIFSRPELA MFV
Length:1,283
Mass (Da):142,250
Last modified:May 31, 2011 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i82D02BECF301A571
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A287TJE9A0A287TJE9_HORVV
Uncharacterized protein
1,099Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A287TJ30A0A287TJ30_HORVV
Uncharacterized protein
936Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A287TJ56A0A287TJ56_HORVV
Uncharacterized protein
802Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AK357387 mRNA Translation: BAJ88601.1

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
HORVU6Hr1G020850.2; HORVU6Hr1G020850.2; HORVU6Hr1G020850
HORVU6Hr1G020850.3; HORVU6Hr1G020850.3; HORVU6Hr1G020850

Gramene; a comparative resource for plants

More...
Gramenei
HORVU6Hr1G020850.2; HORVU6Hr1G020850.2; HORVU6Hr1G020850
HORVU6Hr1G020850.3; HORVU6Hr1G020850.3; HORVU6Hr1G020850

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK357387 mRNA Translation: BAJ88601.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

Protein-protein interaction databases

STRINGi4513.MLOC_70787.1

Proteomic databases

PRIDEiF2D0I0

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiHORVU6Hr1G020850.2; HORVU6Hr1G020850.2; HORVU6Hr1G020850
HORVU6Hr1G020850.3; HORVU6Hr1G020850.3; HORVU6Hr1G020850
GrameneiHORVU6Hr1G020850.2; HORVU6Hr1G020850.2; HORVU6Hr1G020850
HORVU6Hr1G020850.3; HORVU6Hr1G020850.3; HORVU6Hr1G020850

Phylogenomic databases

OrthoDBiEOG093600JF

Family and domain databases

Gene3Di1.25.10.10, 2 hits
InterProiView protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR021133 HEAT_type_2
IPR015016 SF3b_su1
IPR038737 SF3b_su1-like
IPR034085 TOG
PANTHERiPTHR12097 PTHR12097, 1 hit
PfamiView protein in Pfam
PF08920 SF3b1, 1 hit
SMARTiView protein in SMART
SM01349 TOG, 1 hit
SUPFAMiSSF48371 SSF48371, 1 hit
PROSITEiView protein in PROSITE
PS50077 HEAT_REPEAT, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiF2D0I0_HORVV
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: F2D0I0
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: November 7, 2018
This is version 46 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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