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Protein
Submitted name:

Uncharacterized protein

Gene

P4HTM

Organism
Sus scrofa (Pig)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandIronSAAS annotation, Metal-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:P4HTMImported
OrganismiSus scrofa (Pig)Imported
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
Proteomesi
  • UP000008227 Componenti: Chromosome 13

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei54 – 79HelicalSequence analysisAdd BLAST26

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiF1SKI9
PeptideAtlasiF1SKI9
PRIDEiF1SKI9

Expressioni

Gene expression databases

BgeeiENSSSCG00000011368 Expressed in 5 organ(s), highest expression level in adult mammalian kidney
GenevisibleiF1SKI9 SS

Interactioni

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000012121

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini305 – 455Fe2OG dioxygenaseInterPro annotationAdd BLAST151

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG1591 Eukaryota
ENOG410XS5J LUCA
GeneTreeiENSGT00390000014570
InParanoidiF1SKI9
KOiK06711
OMAiYVTVLFY
OrthoDBiEOG091G04NW
TreeFamiTF332923

Family and domain databases

CDDicd00051 EFh, 1 hit
InterProiView protein in InterPro
IPR011992 EF-hand-dom_pair
IPR018247 EF_Hand_1_Ca_BS
IPR002048 EF_hand_dom
IPR005123 Oxoglu/Fe-dep_dioxygenase
IPR006620 Pro_4_hyd_alph
PfamiView protein in Pfam
PF13640 2OG-FeII_Oxy_3, 1 hit
PF13499 EF-hand_7, 1 hit
SMARTiView protein in SMART
SM00702 P4Hc, 1 hit
SUPFAMiSSF47473 SSF47473, 1 hit
PROSITEiView protein in PROSITE
PS00018 EF_HAND_1, 2 hits
PS51471 FE2OG_OXY, 1 hit

Sequencei

Sequence statusi: Complete.

F1SKI9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAAAAAAAGP RREDSSPQWT PPPREPVGAA AGLGDCEDAP VRPLGKPRGI
60 70 80 90 100
CSRAYFLVLM VFVHLYLGNV LALLLFVHYS NGDESSDPGP QRRTQSPGPA
110 120 130 140 150
PTLAPLTRLE GIKVGHERKV QLVADRDHFI RTLSLKPLLF EVPGFLSDEE
160 170 180 190 200
CRLIIHLAQM KGLQRSQILP TEEYEEAMGT MQISQLDLFQ LLDQNHDGHL
210 220 230 240 250
QLREVLAQTR LGNGRWMTPE NIQEMYSAIK ADPDGDGVLS LQEFSDMDLR
260 270 280 290 300
DFHKYMRSHK AESSELVRNS YHTWLYQGEG AHHVMRAIRQ RVLRLTRLSP
310 320 330 340 350
EIVELSEPLQ VVRYGEGGHY HAHVDSGPVY PETICSHTKL VANESVPFET
360 370 380 390 400
SCRYMTVLFY LNNVTGGGET VFPVADNRTY DEMSLIQDDI DLRDTRRHCD
410 420 430 440 450
KGNLRVKPRQ GTAVFWYNYL PDGQGWVGDV DDYSLHGGCL VTRGTKWIAN
460 470 480 490
NWINVDPSRA RQALFQQEMA RLAREGGADS QPEWALDRAY RNARVEL
Length:497
Mass (Da):56,038
Last modified:May 3, 2011 - v1
Checksum:iB4FA08B088AD6BB5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AEMK02000086 Genomic DNA No translation available.
RefSeqiXP_003132246.1, XM_003132198.3
UniGeneiSsc.11479

Genome annotation databases

EnsembliENSSSCT00000012446; ENSSSCP00000012121; ENSSSCG00000011368
GeneIDi110255176
KEGGissc:110255176

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AEMK02000086 Genomic DNA No translation available.
RefSeqiXP_003132246.1, XM_003132198.3
UniGeneiSsc.11479

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000012121

Proteomic databases

PaxDbiF1SKI9
PeptideAtlasiF1SKI9
PRIDEiF1SKI9

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSSSCT00000012446; ENSSSCP00000012121; ENSSSCG00000011368
GeneIDi110255176
KEGGissc:110255176

Organism-specific databases

CTDi54681

Phylogenomic databases

eggNOGiKOG1591 Eukaryota
ENOG410XS5J LUCA
GeneTreeiENSGT00390000014570
InParanoidiF1SKI9
KOiK06711
OMAiYVTVLFY
OrthoDBiEOG091G04NW
TreeFamiTF332923

Gene expression databases

BgeeiENSSSCG00000011368 Expressed in 5 organ(s), highest expression level in adult mammalian kidney
GenevisibleiF1SKI9 SS

Family and domain databases

CDDicd00051 EFh, 1 hit
InterProiView protein in InterPro
IPR011992 EF-hand-dom_pair
IPR018247 EF_Hand_1_Ca_BS
IPR002048 EF_hand_dom
IPR005123 Oxoglu/Fe-dep_dioxygenase
IPR006620 Pro_4_hyd_alph
PfamiView protein in Pfam
PF13640 2OG-FeII_Oxy_3, 1 hit
PF13499 EF-hand_7, 1 hit
SMARTiView protein in SMART
SM00702 P4Hc, 1 hit
SUPFAMiSSF47473 SSF47473, 1 hit
PROSITEiView protein in PROSITE
PS00018 EF_HAND_1, 2 hits
PS51471 FE2OG_OXY, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiF1SKI9_PIG
AccessioniPrimary (citable) accession number: F1SKI9
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: November 7, 2018
This is version 46 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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