UniProtKB - F1SJN6 (F1SJN6_PIG)
Protein
Submitted name:
TSC22 domain family member 2
Gene
TSC22D2
Organism
Sus scrofa (Pig)
Status
Functioni
GO - Biological processi
- regulation of transcription by RNA polymerase II Source: InterPro
- response to osmotic stress Source: Ensembl
Names & Taxonomyi
Protein namesi | Submitted name: TSC22 domain family member 2ImportedSubmitted name: TSC22 domain family protein 2 isoform 1Imported |
Gene namesi | Name:TSC22D2Imported |
Organismi | Sus scrofa (Pig)Imported |
Taxonomic identifieri | 9823 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Laurasiatheria › Artiodactyla › Suina › Suidae › Sus |
Proteomesi |
|
Organism-specific databases
VGNCi | VGNC:94482, TSC22D2 |
Expressioni
Gene expression databases
Bgeei | ENSSSCG00000011708, Expressed in stomach and 39 other tissues |
ExpressionAtlasi | F1SJN6, baseline and differential |
Genevisiblei | F1SJN6, SS |
Family & Domainsi
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 22 – 87 | DisorderedSequence analysisAdd BLAST | 66 | |
Regioni | 127 – 158 | DisorderedSequence analysisAdd BLAST | 32 | |
Regioni | 231 – 427 | DisorderedSequence analysisAdd BLAST | 197 | |
Regioni | 481 – 508 | DisorderedSequence analysisAdd BLAST | 28 | |
Regioni | 568 – 612 | DisorderedSequence analysisAdd BLAST | 45 | |
Regioni | 744 – 787 | DisorderedSequence analysisAdd BLAST | 44 |
Coiled coil
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Coiled coili | 709 – 743 | Sequence analysisAdd BLAST | 35 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 238 – 257 | PolarSequence analysisAdd BLAST | 20 | |
Compositional biasi | 267 – 312 | Pro-richSequence analysisAdd BLAST | 46 | |
Compositional biasi | 574 – 598 | PolarSequence analysisAdd BLAST | 25 | |
Compositional biasi | 744 – 771 | PolarSequence analysisAdd BLAST | 28 |
Sequence similaritiesi
Belongs to the TSC-22/Dip/Bun family.ARBA annotation
Keywords - Domaini
Coiled coilSequence analysisPhylogenomic databases
eggNOGi | KOG4797, Eukaryota |
GeneTreei | ENSGT00940000160465 |
HOGENOMi | CLU_020315_0_0_1 |
InParanoidi | F1SJN6 |
OrthoDBi | 1602203at2759 |
TreeFami | TF318837 |
Family and domain databases
InterProi | View protein in InterPro IPR000580, TSC-22_Dip_Bun |
Pfami | View protein in Pfam PF01166, TSC22, 1 hit |
PROSITEi | View protein in PROSITE PS01289, TSC22, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All
F1SJN6-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MSKMPAKKKS CFQITSVTTA QVATSITEDT ESLDDPDESR TEDVSSEIFD
60 70 80 90 100
VSRATDYGPE EVCERSSSEE TLNNVGDAET PGTVSPNLLL DGQLAAAATA
110 120 130 140 150
PANGGGALST RSVAGVLAST LASAATSAHS SGAPGVPPVA GPSAGPGTAA
160 170 180 190 200
PSQPPTTCSS RFRVIKLDHG SGEPYRRGRW TCMEYYERDS DSSVLTRSGD
210 220 230 240 250
CIRHSNTFDQ TAERDSGLGA TGGSVVVVVA SMPGAHGPDS GTDSSLTAVS
260 270 280 290 300
QLPPSEKMSQ PAPAPPQSFG VGQPQPQPQP PPVGGAVAPS SAPLPPFPGA
310 320 330 340 350
AAGPPQMMAA PPPSQPQGAG HGAVPLGPNG QGLPLTNVTL AQPGLTLPPQ
360 370 380 390 400
PGPAVGAAAA QPSQQFAYPQ PHIPPGHLLP VQPAGQSEYL QPHVAGLQPP
410 420 430 440 450
SPAQPSTAGA GASPAAAASL PVGTGQNAAS SSVQLMGAPS LPGEAVAPGP
460 470 480 490 500
GAVQGAGAAP GLPATVPPAV VGGAVPSGLV PSGQPLPAPP PQMGGSGTPS
510 520 530 540 550
TALGAPHAVV PGVPNVPAAA PAPSVPSVST TSVTMPNVPA PLAQTQQLSS
560 570 580 590 600
HPPVSRSGSI IQHVGLPLAP GTASAPTSLP QSDLSQFQTQ TQPLVGQVDD
610 620 630 640 650
TRRKSESLPQ PPLSLIAENK PVVKPPVADA LANPLQLTPM NSLATSVFSI
660 670 680 690 700
AIPVDGDEDR NPSTAFYQAF HLNTIQESKN LWDSASGGGG VAIDNKIEQA
710 720 730 740 750
MDLVKSHLMY AVREEVEVLK EQIKELVERN SLLERENALL KSLSNNDQLS
760 770 780
QLPAQQANPG STSQQQAVIA QPPQPTQPPQ QPNVSSA
Computationally mapped potential isoform sequencesi
There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basketI3LF59 | I3LF59_PIG | TSC22 domain family member 2 | TSC22D2 | 763 | Annotation score: |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AEMK02000089 Genomic DNA No translation available. DQIR01036301 Transcribed RNA Translation: HCZ91776.1 |
Genome annotation databases
Ensembli | ENSSSCT00000012818; ENSSSCP00000012480; ENSSSCG00000011708 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AEMK02000089 Genomic DNA No translation available. DQIR01036301 Transcribed RNA Translation: HCZ91776.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 9823.ENSSSCP00000012480 |
Proteomic databases
PaxDbi | F1SJN6 |
PRIDEi | F1SJN6 |
Genome annotation databases
Ensembli | ENSSSCT00000012818; ENSSSCP00000012480; ENSSSCG00000011708 |
Organism-specific databases
VGNCi | VGNC:94482, TSC22D2 |
Phylogenomic databases
eggNOGi | KOG4797, Eukaryota |
GeneTreei | ENSGT00940000160465 |
HOGENOMi | CLU_020315_0_0_1 |
InParanoidi | F1SJN6 |
OrthoDBi | 1602203at2759 |
TreeFami | TF318837 |
Gene expression databases
Bgeei | ENSSSCG00000011708, Expressed in stomach and 39 other tissues |
ExpressionAtlasi | F1SJN6, baseline and differential |
Genevisiblei | F1SJN6, SS |
Family and domain databases
InterProi | View protein in InterPro IPR000580, TSC-22_Dip_Bun |
Pfami | View protein in Pfam PF01166, TSC22, 1 hit |
PROSITEi | View protein in PROSITE PS01289, TSC22, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | F1SJN6_PIG | |
Accessioni | F1SJN6Primary (citable) accession number: F1SJN6 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | May 3, 2011 |
Last sequence update: | November 22, 2017 | |
Last modified: | February 10, 2021 | |
This is version 67 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |