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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Sus scrofa (Pig)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-SSC-5685938 HDR through Single Strand Annealing (SSA)
R-SSC-5685939 HDR through MMEJ (alt-NHEJ)
R-SSC-5685942 HDR through Homologous Recombination (HRR)
R-SSC-5693554 Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)
R-SSC-5693568 Resolution of D-loop Structures through Holliday Junction Intermediates
R-SSC-5693579 Homologous DNA Pairing and Strand Exchange
R-SSC-5693607 Processing of DNA double-strand break ends
R-SSC-5693616 Presynaptic phase of homologous DNA pairing and strand exchange
R-SSC-6804756 Regulation of TP53 Activity through Phosphorylation
R-SSC-69473 G2/M DNA damage checkpoint

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiSus scrofa (Pig)Imported
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
Proteomesi
  • UP000008227 Componenti: Chromosome 1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiF1SF59
PRIDEiF1SF59

Interactioni

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000004573

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini27 – 99CtIP_NInterPro annotationAdd BLAST73

Phylogenomic databases

GeneTreeiENSGT00530000063835
InParanoidiF1SF59
OrthoDBiEOG091G1HDT
TreeFamiTF106469

Family and domain databases

InterProiView protein in InterPro
IPR019518 CtIP_N
IPR033594 RBBP8
IPR033316 RBBP8-like
PANTHERiPTHR15107 PTHR15107, 2 hits
PTHR15107:SF4 PTHR15107:SF4, 2 hits
PfamiView protein in Pfam
PF10482 CtIP_N, 1 hit

Sequencei

Sequence statusi: Complete.

F1SF59-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNVSGGSCGS PGSKYDKEAQ GLQVKVNKQL EEFFTKNQQL REQQKVLHET
60 70 80 90 100
IKVLEDGLRA GLCDRCAVTE EHMQKKQQEF ENIWQQNLKL IPELSEQLQQ
110 120 130 140 150
KIENDQPHQV TDLESEEDII PDSPITAFSF PGANQLQRKE NLHVLYVEQT
160 170 180 190 200
QTNVEHSGCE ILVADTCDQS QAPVAKTHGT SSCPGDNLAT VVAETLGLSV
210 220 230 240 250
QEESESRGSR SPLGDKFSDS ISKAPPQEEL TTRGSSPVFG AASSMKSSLG
260 270 280 290 300
LNTSLPPSLL ESGKKNHLKT MPWRNLDQNL KIITNLSSNK PMLISKNVSE
310 320 330 340 350
PVSEQNDIDH IKDTVTDKHV VPLTSLGGRT KRKKIEEENE DEVSCPQASF
360 370 380 390 400
DKENAFLFPL GNQSSMNGDY VMDKPLDLSD RFSAIHRQEK SQGSETSKII
410 420 430 440 450
FRQETLFEAL KPVPKGSSSN RKALSGSCGL ESLLQSLLNP GEGGGKEQPA
460 470 480 490
GSDDSCEITS VLTLLETADQ DKHTSMRSQF SFTEHKDLLE
Length:490
Mass (Da):54,008
Last modified:November 22, 2017 - v2
Checksum:iCD2F7C488E622538
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AEMK02000001 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSSSCT00000004680; ENSSSCP00000004573; ENSSSCG00000004235

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AEMK02000001 Genomic DNA No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000004573

Proteomic databases

PaxDbiF1SF59
PRIDEiF1SF59

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSSSCT00000004680; ENSSSCP00000004573; ENSSSCG00000004235

Phylogenomic databases

GeneTreeiENSGT00530000063835
InParanoidiF1SF59
OrthoDBiEOG091G1HDT
TreeFamiTF106469

Enzyme and pathway databases

ReactomeiR-SSC-5685938 HDR through Single Strand Annealing (SSA)
R-SSC-5685939 HDR through MMEJ (alt-NHEJ)
R-SSC-5685942 HDR through Homologous Recombination (HRR)
R-SSC-5693554 Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)
R-SSC-5693568 Resolution of D-loop Structures through Holliday Junction Intermediates
R-SSC-5693579 Homologous DNA Pairing and Strand Exchange
R-SSC-5693607 Processing of DNA double-strand break ends
R-SSC-5693616 Presynaptic phase of homologous DNA pairing and strand exchange
R-SSC-6804756 Regulation of TP53 Activity through Phosphorylation
R-SSC-69473 G2/M DNA damage checkpoint

Family and domain databases

InterProiView protein in InterPro
IPR019518 CtIP_N
IPR033594 RBBP8
IPR033316 RBBP8-like
PANTHERiPTHR15107 PTHR15107, 2 hits
PTHR15107:SF4 PTHR15107:SF4, 2 hits
PfamiView protein in Pfam
PF10482 CtIP_N, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiF1SF59_PIG
AccessioniPrimary (citable) accession number: F1SF59
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: November 22, 2017
Last modified: May 23, 2018
This is version 40 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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