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Protein
Submitted name:

Uncharacterized protein

Gene

ZIC3

Organism
Sus scrofa (Pig)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:ZIC3Imported
OrganismiSus scrofa (Pig)Imported
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
Proteomesi
  • UP000008227 Componenti: Chromosome X

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiF1RQ88
PRIDEiF1RQ88

Expressioni

Gene expression databases

BgeeiENSSSCG00000012705 Expressed in 1 organ(s), highest expression level in prefrontal cortex

Interactioni

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000013508

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini300 – 327C2H2-typeInterPro annotationAdd BLAST28
Domaini328 – 357C2H2-typeInterPro annotationAdd BLAST30
Domaini358 – 387C2H2-typeInterPro annotationAdd BLAST30
Domaini388 – 415C2H2-typeInterPro annotationAdd BLAST28

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00900000140802
InParanoidiF1RQ88
KOiK18487
OMAiKKTCDRT
OrthoDBiEOG091G0M59
TreeFamiTF351425

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 4 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 5 hits
SUPFAMiSSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 4 hits

Sequencei

Sequence statusi: Complete.

F1RQ88-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTMLLDGGPQ FPGLGVGSFG APRHHEMPNR EPAGMGLNPF GDSPHAAAAA
60 70 80 90 100
AAAAAFKLSP AAAHDLSSGQ SSAFTPQGSG YANALGHHHH HHHHHHHAGQ
110 120 130 140 150
VPSYGGAASA AFNSTRDFLF RQRGSGLGEA ASGSGQHGLF AGSASSLHAP
160 170 180 190 200
AGIPEPPGYL LFPGLHEQGA GHPSPTGHVD NNQVHLGLRG ELFGRADPYR
210 220 230 240 250
PVASPRTDPY TAGAQFPNYS PMNMNMGVNV AAHHGPGAFF RYMRQPIKQE
260 270 280 290 300
LSCKWIDEAQ LSRPKKSCDR TFSTMHELVT HVTMEHVGGP EQNNHVCYWE
310 320 330 340 350
ECPREGKSFK AKYKLVNHIR VHTGEKPFPC PFPGCGKIFA RSENLKIHKR
360 370 380 390 400
THTGEKPFKC EFEGCDRRFA NSSDRKKHMH VHTSDKPYIC KVCDKSYTHP
410 420 430 440 450
SSLRKHMKVH ESQGSDSSPA ASSGYESSTP PAIASANSKD TTKTPSAVQT
460
STSHNPGLPP NFNEWYV
Length:467
Mass (Da):50,461
Last modified:May 3, 2011 - v1
Checksum:i2A7D86D9C3411CC5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AEMK02000122 Genomic DNA No translation available.
RefSeqiXP_001927777.1, XM_001927742.5

Genome annotation databases

EnsembliENSSSCT00000013891; ENSSSCP00000013508; ENSSSCG00000012705
GeneIDi100156863
KEGGissc:100156863

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AEMK02000122 Genomic DNA No translation available.
RefSeqiXP_001927777.1, XM_001927742.5

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000013508

Proteomic databases

PaxDbiF1RQ88
PRIDEiF1RQ88

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSSSCT00000013891; ENSSSCP00000013508; ENSSSCG00000012705
GeneIDi100156863
KEGGissc:100156863

Organism-specific databases

CTDi7547

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00900000140802
InParanoidiF1RQ88
KOiK18487
OMAiKKTCDRT
OrthoDBiEOG091G0M59
TreeFamiTF351425

Gene expression databases

BgeeiENSSSCG00000012705 Expressed in 1 organ(s), highest expression level in prefrontal cortex

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 4 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 5 hits
SUPFAMiSSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 4 hits
ProtoNetiSearch...

Entry informationi

Entry nameiF1RQ88_PIG
AccessioniPrimary (citable) accession number: F1RQ88
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: October 10, 2018
This is version 46 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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