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Entry version 58 (07 Apr 2021)
Sequence version 3 (20 Jun 2018)
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Protein
Submitted name:

Si:ch211-244a23.1

Gene

pkhd1l1.2

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Si:ch211-244a23.1Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:pkhd1l1.2Imported
Synonyms:si:ch211-244a23.1Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri7955 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesDanionidaeDanioninaeDanio
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000437 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 19

Organism-specific databases

Zebrafish Information Network genome database

More...
ZFINi
ZDB-GENE-060503-789, pkhd1l1.2

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei4164 – 4182HelicalSequence analysisAdd BLAST19

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Membrane

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 26Sequence analysisAdd BLAST26
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_501533369527 – 4183Sequence analysisAdd BLAST4157

Keywords - PTMi

GlycoproteinARBA annotation

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSDARG00000040004, Expressed in head and 12 other tissues

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini330 – 486PA14InterPro annotationAdd BLAST157
Domaini2140 – 2260G8InterPro annotationAdd BLAST121
Domaini2995 – 3132G8InterPro annotationAdd BLAST138

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000157594

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
F1QXX9

TreeFam database of animal gene trees

More...
TreeFami
TF329582

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.160.20.10, 1 hit
2.60.40.10, 14 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR039448, Beta_helix
IPR008972, Cupredoxin
IPR019316, G8_domain
IPR013783, Ig-like_fold
IPR014756, Ig_E-set
IPR002909, IPT_dom
IPR037524, PA14/GLEYA
IPR006626, PbH1
IPR012334, Pectin_lyas_fold
IPR011050, Pectin_lyase_fold/virulence

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF13229, Beta_helix, 1 hit
PF10162, G8, 2 hits
PF01833, TIG, 14 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM01225, G8, 2 hits
SM00429, IPT, 12 hits
SM00710, PbH1, 10 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF49503, SSF49503, 1 hit
SSF51126, SSF51126, 2 hits
SSF81296, SSF81296, 14 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51484, G8, 2 hits
PS51820, PA14, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

F1QXX9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRHLRLQLHL TLTVCILLSS AGLTEAQRVD KLMPKYGSLN GGTRLTIWGQ
60 70 80 90 100
GFAQASQFNL NANDPNLGNK VTLVSTTRSI TCDVDRDSSN SKQIMCYTRA
110 120 130 140 150
LPEDSYGVRV SVDGVPIPFS SICNGNTWDY WCIFYSRSFR TPTIQSISPL
160 170 180 190 200
SGPPGTVVTM RGRIFTNVYG SMSTSSNGLD VKLSRAYMGG MPCEFLKPNS
210 220 230 240 250
EEKYGLKLDN GEWGYMSCKM TGTYIGHHNF SYIVSGEYGR SLPDFGVFSI
260 270 280 290 300
SALNKLAMFQ TYAEVTGVSP SAGSMLGGTL LTIQGQNFDE TDQPAMVLVG
310 320 330 340 350
GHECQIRSIS NKKVVCVTPG YERKNVTVFP GGRGIKMETW DISNLNNLED
360 370 380 390 400
VLMYSSNMSG YSVQWVDSLS YVWPNGFHSF VARLSGFFAP LESDNYYFRI
410 420 430 440 450
KSVGRSQLYF SKTGLPQDKV MIASQPYYYY YTSFYGLSSQ KSEVMRLEKL
460 470 480 490 500
KPYYIEVLVH GYSGSASVDV GFFKEISPFT AQQAVEAVNE KQQINAYYDV
510 520 530 540 550
LPEKQVVHFK GWKPTSAIRE VQILRISSAC FSLNTCELTY YQLAYGNLTT
560 570 580 590 600
GPILVSASAM DLQNALNDLW TIKPDNVTVT KQELDTESVY NVTFNSKRGD
610 620 630 640 650
FEDLDYQIID TDLNITVTEA VKGRASMETF TLLWAGVSSL PLPFNASEAE
660 670 680 690 700
VYSALDLMIT AKCPAEIPSS ENSNVKFFRD YETASTGFSG DLSRRGVQVS
710 720 730 740 750
DSEAFCGRWS LKNPEIIFSF HDTTASGAIY SPILLQTYAT VSLCLAYKGQ
760 770 780 790 800
LRNELGILFS YETADTNREE NIRVSVSFDS TEKWNYQCVD LLEYIQAKFE
810 820 830 840 850
GSKYKLLQLS VYGAADYFID AVHIGRSALD PYVIVHRRRP PALASSGLFL
860 870 880 890 900
SNIAVSKQTN ASQISYEITA TPYNCGFDVP LLEIGFLQKM PNSTVDLLIQ
910 920 930 940 950
SQGNATVTVM RPQKASPPLT GTFDVEVFGR RVEGLTIDIS AADLQYALQG
960 970 980 990 1000
IPELGQLQVQ RSGNCRGYTW NIQWLTIPGN QSLIKINASN VIGVNPSVTS
1010 1020 1030 1040 1050
QEVEKGGLFK QKIMGDFLRV PSNKPQVQVF INGIPSWCSG DCGFTWNDLK
1060 1070 1080 1090 1100
TPTVTGISPT EGSSSLGTVL TITGSGFDGG NVTVKTGDVE CSILQVTTSI
1110 1120 1130 1140 1150
TCQVGPASAG VQPVSLSFSV LGNARYQNNT SFNFTHLLGV TSINPTTGSV
1160 1170 1180 1190 1200
AGGTVLTVSG YGFSNNIDVI IGSQPCNIVE VELFQLRCIV PAGSEGDQTV
1210 1220 1230 1240 1250
TIGAGEMTAI FNDSFTYSNT LTALITSVSP QTTTVFGDRI LTILGMHFGE
1260 1270 1280 1290 1300
EPNGSSVLIG DAECELLQWT NDSISCQLPT LPPAVYSVNI RVANQGYPLT
1310 1320 1330 1340 1350
SPDINTTIEY VLEVTGFSPS VGSLYGGTTI TIIGSGFSLD IQDNTVTLGD
1360 1370 1380 1390 1400
TQCRVIAASD NELELYGQGY AWSPSALITS VGDTVVWRWD APAFVPGLGY
1410 1420 1430 1440 1450
RVFSVSNPSS TDYDGISFSS GDRQTAKGFF AYRFTSPGVY YYSSGYIDSA
1460 1470 1480 1490 1500
NEKTLQGVVT VMPLEESTVE LQVFVTGIKA LVNLGQINSS EPECVATSDC
1510 1520 1530 1540 1550
FQDQQEFNDT SDGLYFTFTS CATPTVYDIT PGHGTTHDII NIRGSGFSNI
1560 1570 1580 1590 1600
TCANEVKVGD LPCSVINSSS TEINCQLSPD SGAPVGVPLP ITVQINNLGN
1610 1620 1630 1640 1650
GLLTMPKEID RRFVVLPVVD SIFPVVGSTT GSTRLLISGS GFFSGSVMVA
1660 1670 1680 1690 1700
NIPCNVVSFD YSQIVCDTSP SVARSGDVTV YINSISSSCS SDCTFEYSDS
1710 1720 1730 1740 1750
ITPQVSTVSP NSVNGNSTTV TVTGRGFGNN SADLMISADN ILLAVTEVND
1760 1770 1780 1790 1800
SSIQVLVGAL PAGTYNLTVV VMSKGLATGS ATLTSIAQAS INPTSGSIAG
1810 1820 1830 1840 1850
GTPLLITGNG FVAGNTTVKL GNSLCKILDV TADTVRCLTP PRAEGQVQVN
1860 1870 1880 1890 1900
IKVFDVVYPP QNFNYSRQQT PNITSVTPKT GPVGTQITIS GSGFGTDSAV
1910 1920 1930 1940 1950
VSLQIDSVAC NISSITDTQL LCTVGEHAGG TFPVMFNHQV KGYALTQSVF
1960 1970 1980 1990 2000
KYELLLTGIT PNEGSYAGGA VVAIQGSGFD PNITKVLICN RECTVHLQDS
2010 2020 2030 2040 2050
TSTQLNCEVP PNNGISEALR TCTVMVMNGG DSVNLTSGYT YRSSLTPVIT
2060 2070 2080 2090 2100
NITPRRGGTA GGTRLTITGS GFSSNFSEIG VTIAGSVCDI QSANETQIIC
2110 2120 2130 2140 2150
VTNAGPKSQE TQVRVQQGNR GIARMDNASF FYIDVWSSPY TWGGLSPPEE
2160 2170 2180 2190 2200
GMMVVITAGQ TILLDTSTPV LKMLLIQGGR LIFDEADIEL QAENILITDG
2210 2220 2230 2240 2250
GALQIGTEQM PFQHKAIITL HGHLRSQELP VYGTKTLGVR QGVLDLHGIP
2260 2270 2280 2290 2300
VPVPWTRLSQ TAQNGSSTLT LMHAVTWKTG DEIVIASTGN RRSQRENELR
2310 2320 2330 2340 2350
RIASVSADGR TLTLTEPLTY THLGVSVTLP DGMIFEARAE VGLLTRNIVV
2360 2370 2380 2390 2400
RGSNNAEWND QIPACPDGFD PGEFATQTCF QGRFGEEVGS DQFGGCIMFH
2410 2420 2430 2440 2450
APQPNQNLAI GRIEYVELFN VGQAFRLERY PIHWHLMGDV HFKSYVRGCS
2460 2470 2480 2490 2500
IHQSYNRAVS IHSTHNLLVE QNVIYNIMGG AFFIEDGIET GNILQYNLAV
2510 2520 2530 2540 2550
FVKQSTSLQN EDITPAAFWI TNPNNTIRHN AVAGGTHFGF WYRMPDDFND
2560 2570 2580 2590 2600
PIYDAYICPK RVPLGQFFNN TVHSQGWFGL WIFQDFFPME TGSCSYSTPT
2610 2620 2630 2640 2650
PAVFRRLTSW NNEKGAEWVN VGSVQFSEFL MVNNEKAGVE AKRIIWHYVS
2660 2670 2680 2690 2700
GWGLDGGAAV VNSTMVGHVD ELGLGSDYCT NRGIVLPLDD GMSVINTTFV
2710 2720 2730 2740 2750
NFNRSSCAAV SLAEIAESCS PRCGGWSARF SGIKFYHSPN KAWLRWEHEV
2760 2770 2780 2790 2800
ALVDIDGSLT GNVSNKVVPK NNLLDPRHCF PATEWSIGIP AAVCDNTINF
2810 2820 2830 2840 2850
HRMVIYYPSY TLWAKDVILT NSYGSSVLPF LYTFMTHSYG WMAMLPTGQT
2860 2870 2880 2890 2900
YNWLFNGASQ ITSISYYGMV YSFRPENYVI INHNMTQTPD MVHIIDYRSG
2910 2920 2930 2940 2950
SPEPLNSTVN VNGDWYINQS SNSLYYMVSG RDRVSSRRKR NSVDRSLIDR
2960 2970 2980 2990 3000
YLVFNVYQCY YPKCIAPTFT PSPEVSFGPD TLQTPANFTR WSNTSFWRSS
3010 3020 3030 3040 3050
PENNFNVPQE GSDVIIPAYV WMVVDVVVPS LNKLKIAGVL EIPDTNNDTS
3060 3070 3080 3090 3100
IMQYNNVVLN ATYISIQGGR LIAGWPNEPF RGQLQIILRG SHTTPDWLLP
3110 3120 3130 3140 3150
YGTNQGSKVL GVFGSLDLYG MPHNVYHTKL ASTSQAGNST LSLQESVDWK
3160 3170 3180 3190 3200
AGDKILLSTT SYDPWQTEIR TIAAVSDYGR TLTLDQPLTY THIGESYSVP
3210 3220 3230 3240 3250
GTSRSYQLAG NVALLTRNIQ IIGQEYPDMF TESYGARVLV GTFSGFRGKA
3260 3270 3280 3290 3300
QIRNVQFYHT GQEGWNDLSD PRYSLVFLNL GWVAGESYIS GCSFHDGFAP
3310 3320 3330 3340 3350
AIGIFGTDGL SIDDNVIHHT VGEGISVKGD SNVIQRNLVT LTLWPGSYNG
3360 3370 3380 3390 3400
RAEDFNFQWN AAIEVNEATN VTLKGNIVAG YERVGFRIDG EPCPGFSESE
3410 3420 3430 3440 3450
AQWSQNEAHG GLYGLYMNRD GLPGCSQIQG FTVWRSFDFG IYVQVSMNVL
3460 3470 3480 3490 3500
ISNVTLIDNG MGIMSLIYNP PSISHMYADK SVRVQGALIV GNSPNFNCLD
3510 3520 3530 3540 3550
SLSTTMTFVS LSRSHRAPRP PSGGRSGVCW PTFESYHNSG PQNLLTGLTS
3560 3570 3580 3590 3600
YSAIAGLMTI SDTTFIGFQN VCSTERNYMF MTNPGNEDLQ HPISVERITM
3610 3620 3630 3640 3650
INSTEDSLAF IHRPDLSKVN PSDCVDMDCD AKKKTMLKDL DGSFLGAVGA
3660 3670 3680 3690 3700
VVPQSEYEWN GNPRHGLGDY RIPKVMLTYL NGSRIPVNQI SPYKGVIRSN
3710 3720 3730 3740 3750
CTYMSTWQSY KCFGLNYKML VIESLDTDTE TRRLSPVAIL GDKYVDLING
3760 3770 3780 3790 3800
PQDHSWCSGY TCRKRISLFH AIVATNKSFD IYFTSTTPQK LRLMLLNAGP
3810 3820 3830 3840 3850
TESVRVAVFY SNPQRLDVYV NNSLVGPTNA QWNVDKTDYT LLEPTYTGQY
3860 3870 3880 3890 3900
FPSFNASHGS NFLDQDYKMM NILLRGSDPV QIRTSPVLFV AFNLPAMTEA
3910 3920 3930 3940 3950
EFFGPNLINN LAAFLKIPPY KIRITKIIRE GTNARRRRST GLTVQVEIRE
3960 3970 3980 3990 4000
PPAQTTTNST TDNTQQFDVL KNIADDLGRA AVSGNLSQSI GFNVSSMGII
4010 4020 4030 4040 4050
PPPPSSSDPA WNNVATQEVT RADQQVETVK TVSSLKVVVQ PQAGSSLGPL
4060 4070 4080 4090 4100
SVQPSIMALD SAGDCVSVGV TSLTLSAVLK DANGNLVNGL YGNTTIPFSV
4110 4120 4130 4140 4150
CWANYTDLAI NTSCGSCQNL KLVFTLTQWN AESRSFTLRS PTTPSSVGNG
4160 4170 4180
FPNIFGSSPA ISTMSVYLLI LFSALLLLLQ CYE
Length:4,183
Mass (Da):456,533
Last modified:June 20, 2018 - v3
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iD55E6A82E8D24DC3
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A8E7R5A8E7R5_DANRE
Si:ch211-244a23.1
pkhd1l1.2 si:ch211-244a23.1
3,895Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
I3IS60I3IS60_DANRE
Si:ch211-244a23.1
pkhd1l1.2 si:ch211-244a23.1
4,198Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
BX649562 Genomic DNA No translation available.

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSDART00000124987; ENSDARP00000105859; ENSDARG00000040004

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX649562 Genomic DNA No translation available.

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsembliENSDART00000124987; ENSDARP00000105859; ENSDARG00000040004

Organism-specific databases

ZFINiZDB-GENE-060503-789, pkhd1l1.2

Phylogenomic databases

GeneTreeiENSGT00940000157594
InParanoidiF1QXX9
TreeFamiTF329582

Gene expression databases

BgeeiENSDARG00000040004, Expressed in head and 12 other tissues

Family and domain databases

Gene3Di2.160.20.10, 1 hit
2.60.40.10, 14 hits
InterProiView protein in InterPro
IPR039448, Beta_helix
IPR008972, Cupredoxin
IPR019316, G8_domain
IPR013783, Ig-like_fold
IPR014756, Ig_E-set
IPR002909, IPT_dom
IPR037524, PA14/GLEYA
IPR006626, PbH1
IPR012334, Pectin_lyas_fold
IPR011050, Pectin_lyase_fold/virulence
PfamiView protein in Pfam
PF13229, Beta_helix, 1 hit
PF10162, G8, 2 hits
PF01833, TIG, 14 hits
SMARTiView protein in SMART
SM01225, G8, 2 hits
SM00429, IPT, 12 hits
SM00710, PbH1, 10 hits
SUPFAMiSSF49503, SSF49503, 1 hit
SSF51126, SSF51126, 2 hits
SSF81296, SSF81296, 14 hits
PROSITEiView protein in PROSITE
PS51484, G8, 2 hits
PS51820, PA14, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiF1QXX9_DANRE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: F1QXX9
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: June 20, 2018
Last modified: April 7, 2021
This is version 58 of the entry and version 3 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
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