UniProtKB - F1QSS3 (F1QSS3_DANRE)
Protein
Submitted name:
Zgc:113452
Gene
zgc:113452
Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Functioni
GO - Molecular functioni
- DNA-binding transcription factor activity, RNA polymerase II-specific Source: GO_Central
- RNA polymerase II transcription regulatory region sequence-specific DNA binding Source: GO_Central
GO - Biological processi
- regulation of transcription by RNA polymerase II Source: GO_Central
Keywordsi
Ligand | Metal-binding, Zinc |
Names & Taxonomyi
Protein namesi | Submitted name: Zgc:113452Imported |
Gene namesi | ORF Names:zgc:113452Imported |
Organismi | Danio rerio (Zebrafish) (Brachydanio rerio)Imported |
Taxonomic identifieri | 7955 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Danionidae › Danioninae › Danio |
Proteomesi |
|
Organism-specific databases
ZFINi | ZDB-GENE-050913-16, zgc:113452 |
Expressioni
Gene expression databases
Bgeei | ENSDARG00000074146, Expressed in cleaving embryo and 30 other tissues |
ExpressionAtlasi | F1QSS3, baseline |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 87 – 114 | C2H2-typeInterPro annotationAdd BLAST | 28 | |
Domaini | 125 – 152 | C2H2-typeInterPro annotationAdd BLAST | 28 | |
Domaini | 153 – 180 | C2H2-typeInterPro annotationAdd BLAST | 28 | |
Domaini | 181 – 208 | C2H2-typeInterPro annotationAdd BLAST | 28 | |
Domaini | 209 – 234 | C2H2-typeInterPro annotationAdd BLAST | 26 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 27 | DisorderedSequence analysisAdd BLAST | 27 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 9 – 27 | PolyampholyteSequence analysisAdd BLAST | 19 |
Keywords - Domaini
Zinc-fingerPROSITE-ProRule annotationPhylogenomic databases
GeneTreei | ENSGT00940000154446 |
HOGENOMi | CLU_002678_2_6_1 |
Family and domain databases
InterProi | View protein in InterPro IPR036236, Znf_C2H2_sf IPR013087, Znf_C2H2_type |
Pfami | View protein in Pfam PF00096, zf-C2H2, 4 hits |
SMARTi | View protein in SMART SM00355, ZnF_C2H2, 5 hits |
SUPFAMi | SSF57667, SSF57667, 3 hits |
PROSITEi | View protein in PROSITE PS00028, ZINC_FINGER_C2H2_1, 5 hits PS50157, ZINC_FINGER_C2H2_2, 5 hits |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All
F1QSS3-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MSSTHTAVKT EFIKEESEEV RIPEPCGDEE EEALTLKKEE PEEHTAQIEI
60 70 80 90 100
KLNEDLQDYE QPQYLSCSRI GTSLTQKRAR RGKGFFFSCL ECQMSFESKE
110 120 130 140 150
HLMEHFRVHT GESSTQTNTL QKQPMFCHQC FREFSCREHL LEHYRIHKVE
160 170 180 190 200
KPFPCEECGK SFYHKQSLAN HANSHTDLRP YVCQHCGKGY IHEDSLIIHL
210 220 230
RIHELDKPFK CDQCERSYTH KHSLTYHLKV HTGL
Computationally mapped potential isoform sequencesi
There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basketE7FDT5 | E7FDT5_DANRE | Zgc:113452 | zgc:113452 | 235 | Annotation score: |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CU928013 Genomic DNA No translation available. |
Genome annotation databases
Ensembli | ENSDART00000082086; ENSDARP00000076523; ENSDARG00000074146 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CU928013 Genomic DNA No translation available. |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Genome annotation databases
Ensembli | ENSDART00000082086; ENSDARP00000076523; ENSDARG00000074146 |
Organism-specific databases
ZFINi | ZDB-GENE-050913-16, zgc:113452 |
Phylogenomic databases
GeneTreei | ENSGT00940000154446 |
HOGENOMi | CLU_002678_2_6_1 |
Gene expression databases
Bgeei | ENSDARG00000074146, Expressed in cleaving embryo and 30 other tissues |
ExpressionAtlasi | F1QSS3, baseline |
Family and domain databases
InterProi | View protein in InterPro IPR036236, Znf_C2H2_sf IPR013087, Znf_C2H2_type |
Pfami | View protein in Pfam PF00096, zf-C2H2, 4 hits |
SMARTi | View protein in SMART SM00355, ZnF_C2H2, 5 hits |
SUPFAMi | SSF57667, SSF57667, 3 hits |
PROSITEi | View protein in PROSITE PS00028, ZINC_FINGER_C2H2_1, 5 hits PS50157, ZINC_FINGER_C2H2_2, 5 hits |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | F1QSS3_DANRE | |
Accessioni | F1QSS3Primary (citable) accession number: F1QSS3 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | May 3, 2011 |
Last sequence update: | May 3, 2011 | |
Last modified: | December 2, 2020 | |
This is version 60 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |