UniProtKB - F1QL56 (F1QL56_DANRE)
Protein
Submitted name:
Zinc finger and BTB domain-containing 17
Gene
zbtb17
Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Functioni
GO - Molecular functioni
- DNA-binding transcription factor activity, RNA polymerase II-specific Source: GO_Central
- RNA polymerase II cis-regulatory region sequence-specific DNA binding Source: GO_Central
GO - Biological processi
- regulation of T cell migration Source: ZFIN
- regulation of transcription by RNA polymerase II Source: GO_Central
Keywordsi
Ligand | Metal-binding, Zinc |
Names & Taxonomyi
Protein namesi | Submitted name: Zinc finger and BTB domain-containing 17Imported |
Gene namesi | Name:zbtb17Imported |
Organismi | Danio rerio (Zebrafish) (Brachydanio rerio)Imported |
Taxonomic identifieri | 7955 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Danionidae › Danioninae › Danio |
Proteomesi |
|
Organism-specific databases
ZFINi | ZDB-GENE-090313-240, zbtb17 |
Expressioni
Gene expression databases
Bgeei | ENSDARG00000074548, Expressed in blastula and 25 other tissues |
ExpressionAtlasi | F1QL56, baseline |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 18 – 45 | C2H2-typeInterPro annotationAdd BLAST | 28 | |
Domaini | 46 – 73 | C2H2-typeInterPro annotationAdd BLAST | 28 | |
Domaini | 74 – 101 | C2H2-typeInterPro annotationAdd BLAST | 28 | |
Domaini | 102 – 129 | C2H2-typeInterPro annotationAdd BLAST | 28 | |
Domaini | 130 – 157 | C2H2-typeInterPro annotationAdd BLAST | 28 | |
Domaini | 158 – 185 | C2H2-typeInterPro annotationAdd BLAST | 28 | |
Domaini | 186 – 213 | C2H2-typeInterPro annotationAdd BLAST | 28 | |
Domaini | 214 – 241 | C2H2-typeInterPro annotationAdd BLAST | 28 | |
Domaini | 242 – 269 | C2H2-typeInterPro annotationAdd BLAST | 28 | |
Domaini | 270 – 298 | C2H2-typeInterPro annotationAdd BLAST | 29 | |
Domaini | 394 – 421 | C2H2-typeInterPro annotationAdd BLAST | 28 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 451 – 491 | DisorderedSequence analysisAdd BLAST | 41 |
Coiled coil
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Coiled coili | 366 – 386 | Sequence analysisAdd BLAST | 21 |
Keywords - Domaini
Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationPhylogenomic databases
GeneTreei | ENSGT00940000159957 |
HOGENOMi | CLU_002678_44_10_1 |
Family and domain databases
InterProi | View protein in InterPro IPR036236, Znf_C2H2_sf IPR013087, Znf_C2H2_type |
Pfami | View protein in Pfam PF00096, zf-C2H2, 10 hits |
SMARTi | View protein in SMART SM00355, ZnF_C2H2, 11 hits |
SUPFAMi | SSF57667, SSF57667, 8 hits |
PROSITEi | View protein in PROSITE PS00028, ZINC_FINGER_C2H2_1, 11 hits PS50157, ZINC_FINGER_C2H2_2, 11 hits |
(1+)i Sequence
Sequence statusi: Fragment.
This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All
F1QL56-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
XPAACKAHEK THSPVKPYCC STCGKSYRQI SLLNLHRKRH TDEARYSCED
60 70 80 90 100
CGKLFTTSGN LKRHQLVHSG EKPYQCDHCD RAFSDPTAKM RHLETHDTDK
110 120 130 140 150
GHKCQHCDKK FNQVGNLKAH LKIHIADGPL KCKECGKQFT TSGNLKRHLR
160 170 180 190 200
VHSGEKPFIC MHCQRAFADP GALQRHVRIH TGEKPCLCLI CGKGFTQASS
210 220 230 240 250
LIAHVRQHTG EKPYVCDRCG KRFVQSSQLA NHIRHHDNIR PHKCQTCNKA
260 270 280 290 300
FVNVGDLSKH IIIHTGEKPF LCDKCGRGFN RVDNLRSHVK TVHQGKAGMK
310 320 330 340 350
RLVVAEDDDG EDKLLADSNP DSELDSNEVN IVTVTTDDIV TLATEALAAT
360 370 380 390 400
TVAQLTVVPV AASVSADETE ALKAEITKAV EKVQEADPNT QILYACDSCG
410 420 430 440 450
EKFLDASSLA QHVRIHTAQA LVMFQADSDF YQQYTGDATW QTTEQVIQGG
460 470 480 490
ELLFRTRDEE SEEAQPESQM DGAEVESEDG AEKVHSESQQ Q
Computationally mapped potential isoform sequencesi
There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basketE7F500 | E7F500_DANRE | Zinc finger and BTB domain-containi... | zbtb17 | 794 | Annotation score: |
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Non-terminal residuei | 1 | Imported | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CR925709 Genomic DNA No translation available. |
Genome annotation databases
Ensembli | ENSDART00000141552; ENSDARP00000120598; ENSDARG00000074548 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CR925709 Genomic DNA No translation available. |
3D structure databases
ModBasei | Search... |
Genome annotation databases
Ensembli | ENSDART00000141552; ENSDARP00000120598; ENSDARG00000074548 |
Organism-specific databases
ZFINi | ZDB-GENE-090313-240, zbtb17 |
Phylogenomic databases
GeneTreei | ENSGT00940000159957 |
HOGENOMi | CLU_002678_44_10_1 |
Gene expression databases
Bgeei | ENSDARG00000074548, Expressed in blastula and 25 other tissues |
ExpressionAtlasi | F1QL56, baseline |
Family and domain databases
InterProi | View protein in InterPro IPR036236, Znf_C2H2_sf IPR013087, Znf_C2H2_type |
Pfami | View protein in Pfam PF00096, zf-C2H2, 10 hits |
SMARTi | View protein in SMART SM00355, ZnF_C2H2, 11 hits |
SUPFAMi | SSF57667, SSF57667, 8 hits |
PROSITEi | View protein in PROSITE PS00028, ZINC_FINGER_C2H2_1, 11 hits PS50157, ZINC_FINGER_C2H2_2, 11 hits |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | F1QL56_DANRE | |
Accessioni | F1QL56Primary (citable) accession number: F1QL56 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | May 3, 2011 |
Last sequence update: | May 3, 2011 | |
Last modified: | December 2, 2020 | |
This is version 64 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |