UniProtKB - F1QKA0 (F1QKA0_DANRE)
Protein
Submitted name:
Embigin
Gene
emb
Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Functioni
GO - Molecular functioni
- cell-cell adhesion mediator activity Source: GO_Central
GO - Biological processi
- axon guidance Source: GO_Central
- dendrite self-avoidance Source: GO_Central
- homophilic cell adhesion via plasma membrane adhesion molecules Source: GO_Central
Names & Taxonomyi
Protein namesi | Submitted name: EmbiginImported |
Gene namesi | |
Organismi | Danio rerio (Zebrafish) (Brachydanio rerio)Imported |
Taxonomic identifieri | 7955 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Danionidae › Danioninae › Danio |
Proteomesi |
|
Organism-specific databases
ZFINi | ZDB-GENE-070705-158, emb |
Subcellular locationi
Plasma Membrane
- plasma membrane Source: GO_Central
Other locations
- axon Source: GO_Central
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Signal peptidei | 1 – 20 | Sequence analysisAdd BLAST | 20 | |
ChainiPRO_5015356813 | 21 – 300 | Sequence analysisAdd BLAST | 280 |
Expressioni
Gene expression databases
Bgeei | ENSDARG00000059485, Expressed in testis and 19 other tissues |
ExpressionAtlasi | F1QKA0, baseline |
Interactioni
GO - Molecular functioni
- cell-cell adhesion mediator activity Source: GO_Central
Protein-protein interaction databases
STRINGi | 7955.ENSDARP00000117091 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 30 – 127 | Ig-likeInterPro annotationAdd BLAST | 98 | |
Domaini | 133 – 228 | Ig-likeInterPro annotationAdd BLAST | 96 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 262 – 300 | DisorderedSequence analysisAdd BLAST | 39 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 266 – 288 | PolarSequence analysisAdd BLAST | 23 |
Keywords - Domaini
SignalSequence analysisPhylogenomic databases
eggNOGi | ENOG502RYF2, Eukaryota |
GeneTreei | ENSGT00940000158944 |
OMAi | LCEVYTQ |
Family and domain databases
Gene3Di | 2.60.40.10, 2 hits |
InterProi | View protein in InterPro IPR043204, Basigin-like IPR027114, Embigin IPR007110, Ig-like_dom IPR036179, Ig-like_dom_sf IPR013783, Ig-like_fold IPR013098, Ig_I-set IPR003599, Ig_sub |
PANTHERi | PTHR10075, PTHR10075, 1 hit PTHR10075:SF4, PTHR10075:SF4, 1 hit |
Pfami | View protein in Pfam PF07679, I-set, 1 hit |
SMARTi | View protein in SMART SM00409, IG, 1 hit |
SUPFAMi | SSF48726, SSF48726, 2 hits |
PROSITEi | View protein in PROSITE PS50835, IG_LIKE, 2 hits |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All
F1QKA0-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MAKYMAKTVL LLLFCQGIHA DTTTSPESDP VVTTRKAAPK GQGQVIIEEL
60 70 80 90 100
AILTPQYIEL LCNLTDIPNN PPYMTGYWTK DGKEIENSEE TINRNNAQYI
110 120 130 140 150
LKKTFSIQAR DLGNYSCVFR ENDARVTFVL QVPVMKDKRD KPVVSYIGDS
160 170 180 190 200
VVLVCKLKHM PNTWNWYKAN NTEKELINVT ADPLKYKILL NGNETKLTVL
210 220 230 240 250
NLTEAQSGKY ICSAEFDIKA SESQVELKVL SYTEPLKPFV AIVAEVLLLV
260 270 280 290 300
TLICLWEKCS KPKHSSSTAD DVYSEQTSKL THDESNGVEN NTTRQRKLEH
Computationally mapped potential isoform sequencesi
There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketA0A2R9YJN4 | A0A2R9YJN4_DANRE | Embigin | emb si:ch211-261c8.5 | 325 | Annotation score: | ||
E9QHC0 | E9QHC0_DANRE | Embigin | emb si:ch211-261c8.5 | 199 | Annotation score: |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BX255900 Genomic DNA No translation available. |
Genome annotation databases
Ensembli | ENSDART00000082745; ENSDARP00000077180; ENSDARG00000059485 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BX255900 Genomic DNA No translation available. |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 7955.ENSDARP00000117091 |
Genome annotation databases
Ensembli | ENSDART00000082745; ENSDARP00000077180; ENSDARG00000059485 |
Organism-specific databases
ZFINi | ZDB-GENE-070705-158, emb |
Phylogenomic databases
eggNOGi | ENOG502RYF2, Eukaryota |
GeneTreei | ENSGT00940000158944 |
OMAi | LCEVYTQ |
Gene expression databases
Bgeei | ENSDARG00000059485, Expressed in testis and 19 other tissues |
ExpressionAtlasi | F1QKA0, baseline |
Family and domain databases
Gene3Di | 2.60.40.10, 2 hits |
InterProi | View protein in InterPro IPR043204, Basigin-like IPR027114, Embigin IPR007110, Ig-like_dom IPR036179, Ig-like_dom_sf IPR013783, Ig-like_fold IPR013098, Ig_I-set IPR003599, Ig_sub |
PANTHERi | PTHR10075, PTHR10075, 1 hit PTHR10075:SF4, PTHR10075:SF4, 1 hit |
Pfami | View protein in Pfam PF07679, I-set, 1 hit |
SMARTi | View protein in SMART SM00409, IG, 1 hit |
SUPFAMi | SSF48726, SSF48726, 2 hits |
PROSITEi | View protein in PROSITE PS50835, IG_LIKE, 2 hits |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | F1QKA0_DANRE | |
Accessioni | F1QKA0Primary (citable) accession number: F1QKA0 Secondary accession number(s): F1QQB2 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | May 3, 2011 |
Last sequence update: | June 20, 2018 | |
Last modified: | April 7, 2021 | |
This is version 61 of the entry and version 3 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |