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Entry version 69 (02 Jun 2021)
Sequence version 2 (20 Jan 2016)
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Protein
Submitted name:

Dachsous cadherin-related 1b

Gene

dchs1b

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

LigandCalciumPROSITE-ProRule annotationARBA annotation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Dachsous cadherin-related 1bImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:dchs1bImported
Synonyms:dchs1Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri7955 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesDanionidaeDanioninaeDanio
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000437 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 10

Organism-specific databases

Zebrafish Information Network genome database

More...
ZFINi
ZDB-GENE-050208-41, dchs1b

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei2916 – 2942HelicalSequence analysisAdd BLAST27

Keywords - Cellular componenti

Membrane

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
F1QGX1

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSDARG00000079850, Expressed in embryo and 38 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
F1QGX1, baseline

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
7955.ENSDARP00000109139

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini45 – 144CadherinInterPro annotationAdd BLAST100
Domaini145 – 256CadherinInterPro annotationAdd BLAST112
Domaini257 – 363CadherinInterPro annotationAdd BLAST107
Domaini375 – 473CadherinInterPro annotationAdd BLAST99
Domaini474 – 580CadherinInterPro annotationAdd BLAST107
Domaini581 – 687CadherinInterPro annotationAdd BLAST107
Domaini688 – 792CadherinInterPro annotationAdd BLAST105
Domaini793 – 895CadherinInterPro annotationAdd BLAST103
Domaini897 – 1001CadherinInterPro annotationAdd BLAST105
Domaini1002 – 1114CadherinInterPro annotationAdd BLAST113
Domaini1115 – 1217CadherinInterPro annotationAdd BLAST103
Domaini1222 – 1325CadherinInterPro annotationAdd BLAST104
Domaini1336 – 1433CadherinInterPro annotationAdd BLAST98
Domaini1434 – 1544CadherinInterPro annotationAdd BLAST111
Domaini1544 – 1648CadherinInterPro annotationAdd BLAST105
Domaini1649 – 1750CadherinInterPro annotationAdd BLAST102
Domaini1751 – 1854CadherinInterPro annotationAdd BLAST104
Domaini1855 – 1959CadherinInterPro annotationAdd BLAST105
Domaini1960 – 2063CadherinInterPro annotationAdd BLAST104
Domaini2064 – 2166CadherinInterPro annotationAdd BLAST103
Domaini2167 – 2271CadherinInterPro annotationAdd BLAST105
Domaini2271 – 2371CadherinInterPro annotationAdd BLAST101
Domaini2372 – 2476CadherinInterPro annotationAdd BLAST105
Domaini2477 – 2593CadherinInterPro annotationAdd BLAST117
Domaini2594 – 2696CadherinInterPro annotationAdd BLAST103
Domaini2697 – 2801CadherinInterPro annotationAdd BLAST105
Domaini2802 – 2914CadherinInterPro annotationAdd BLAST113

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni2950 – 3023DisorderedSequence analysisAdd BLAST74
Regioni3178 – 3221DisorderedSequence analysisAdd BLAST44

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi2953 – 2969Polar residuesSequence analysisAdd BLAST17

Keywords - Domaini

RepeatARBA annotation, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG3594, Eukaryota

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000163671

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_000265_2_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
F1QGX1

Identification of Orthologs from Complete Genome Data

More...
OMAi
ERYFVID

TreeFam database of animal gene trees

More...
TreeFami
TF316403

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR002126, Cadherin-like_dom
IPR015919, Cadherin-like_sf
IPR020894, Cadherin_CS

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00028, Cadherin, 25 hits

Protein Motif fingerprint database; a protein domain database

More...
PRINTSi
PR00205, CADHERIN

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00112, CA, 26 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF49313, SSF49313, 27 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS00232, CADHERIN_1, 13 hits
PS50268, CADHERIN_2, 27 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

F1QGX1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTLFDDFGKN THGHFWVWVI RRLRMLLVVC VVAELLTVMV NGEGTPGILE
60 70 80 90 100
LQLDEEQPAG TIVGDISAGL QPGVTASLYF ISDHEGTGIG SDLHIDETTG
110 120 130 140 150
IIKTARRLDR EERDHYSFIA VTMTGFTVKV SITVNDINDH APTFPKKKAS
160 170 180 190 200
LKIPEQTAVG TKFSLEPATD ADKDQLTVQG YQIKEGNVGQ VFRLETKRAA
210 220 230 240 250
NKVLYLDLVV NGVLDREKRS SYSLVVEAFD GGSPRQNGQM TLDILVQDIN
260 270 280 290 300
DHAPVFNQSR YNAIISESLP QGSNILQVFA SDADEGDNGL VLYEINRRQS
310 320 330 340 350
DPDRYFVIDP RSGIITLNKA LDYEMRKVHE LVVQARDNAS HPEITNAFVT
360 370 380 390 400
IHVRDYNDNQ PTMTIIFLSE DGSPQISEGA QPGQYVARIS VSDPDYGEYS
410 420 430 440 450
NVNVSLEGGD GKFALTTKDS IIYLIYVDQI LDREERDSYE LRVMATDSGT
460 470 480 490 500
PPLHAESSFT IHVTDVNDNP PLFDQQAYKQ TIPEVVYPGS FVLQVTARDK
510 520 530 540 550
DQGPNGDIRY SILPDKKTHS SWFTIDPVTG IITTATKLDY ETIPKPSIKV
560 570 580 590 600
VATDGGRPPL SSTAVVEIDL QDTNDNEPVF GSSFYNVSIK ENTSEGTCFL
610 620 630 640 650
EVKADDADGG SFGTITYSIG SGSVSAPLSQ FSINKESGQI CTSTALDRDE
660 670 680 690 700
GADSFHFTVT ATDGGGLSSS ASVLVSLEDI NDNRPSFYPL NYAVSLSTQS
710 720 730 740 750
SPGTSVIRVT AHDPDAGANG RVTYHTVSGG GSSFFTLNKD TGVISLSRSL
760 770 780 790 800
HGKANSVIPM VISARDGGGL TAPVNARVNI SVVGGSVAPP VFEQAQYFFT
810 820 830 840 850
VSEDVLRGTE VGVVRASSRN GVSKDVTYTI SAGDPDGYFM VDPETGALRT
860 870 880 890 900
SLPLDHESRP FFDLEIQARS GSPPAFGDTR VRVTIADVND NAPIFFPSSS
910 920 930 940 950
ESLLLPEATK MGTIVYRVQA EDRDSGPNGQ LSFDLISSGG QRTFGVERSS
960 970 980 990 1000
GEVRLIGSLS YDSVPRYDLQ VIAKDSGAPQ LSATFSLVVH IQAENNQGPV
1010 1020 1030 1040 1050
FDTITYRVEL KENTPLNTNF LQVRALNRDP NGNGGSSTPT STLAYRLRPD
1060 1070 1080 1090 1100
GDAVGFGIAP DSGWLFVKSA LDREVKDIYL LTVLATSGSG QMGRTGSATI
1110 1120 1130 1140 1150
RVSVTDENDN APRFSQERVF LAVRENLPAG TGFGRVSATD RDAGLNSRLT
1160 1170 1180 1190 1200
YRLLHTDRYF QINSQTGEIS TRAALDREHQ SSYQLMVVVQ DGGTPPRSAT
1210 1220 1230 1240 1250
GTAHITVLDE NDNAPAFSHT QPGREILIQV QEGLPAGSLL GTLNAKDPDE
1260 1270 1280 1290 1300
GENGTIFYSL SGSRAERFSL NPNTGELRSS SPLRRAEKAE YSFTITASDR
1310 1320 1330 1340 1350
GAPSQSSSAV LLIQVIGSTR ISPKPNTLSM TLNSVEGAKP GSVIGSVRAH
1360 1370 1380 1390 1400
DQREVTLNGQ VTYLVVGGTD HEGTFMVDRL TGDVYLAREL DYEKGSRYTL
1410 1420 1430 1440 1450
QIEVDDFSKA YPNTHMIQLE INVQDSNDHA PQFPEDPVTI VIPENTQAGS
1460 1470 1480 1490 1500
SVYTFQATDK DGSGPNSEIR YSVQQRWPDN PDLFNLDPVT GVLKLGRELD
1510 1520 1530 1540 1550
HEETSSLFLV VQAMDSALDP NQRLWGSVTA RVFVTDENDN APIFSSPTAV
1560 1570 1580 1590 1600
SVMEDQPVGF VLLYVMAWDA DQGENGRVSY RIQSGNTAGR FVLSSNSGSL
1610 1620 1630 1640 1650
SILKPLDREE QESYNLTIVA EDHGIPQHST TQVLSIQVID VNDEAPWFER
1660 1670 1680 1690 1700
NEFEAQIREN QPAGTSIIQV TASDRDHGTN GLVTYGGVTE DGFTINAETG
1710 1720 1730 1740 1750
VISATRVLDR ELQDHYTITV YAKDGGIPPN FAKAKVHITV LDENDNAPAF
1760 1770 1780 1790 1800
GLQQYSLEVP ENLQPVELFT LKATDRDIGE SGRLEYKIKA GDPDGDFRLD
1810 1820 1830 1840 1850
GSSGALSTSR PLDRERKSSY SLQVVVQDHG SPSLNSTASV EISVLDVNDN
1860 1870 1880 1890 1900
SPKFSSSSYT VDVSEDAAIG LVVLDATATD VDEGQNGQIL YFLSQEAKGA
1910 1920 1930 1940 1950
FTVDPNTGRI TTAALLDREK RASYFFQVYA VDLSPAAPRN STAQVTVTIL
1960 1970 1980 1990 2000
DVNDNAPFFI QDPLIINVSS GSVFTHQVVA TMRAEDKDFG ANGSVFYRFA
2010 2020 2030 2040 2050
MPVRGFAINS LTGAIQTTEN LQTLTQTQRT LIVEAMDQGS PPQSSLGVVI
2060 2070 2080 2090 2100
IYVKEQDYKG IRFSRTARDV SLQENADKGT VVAQAQAQHP DGTRDGINYS
2110 2120 2130 2140 2150
IFSGNKYHSF SISSNTGEIW VQSSNGLDFE DTPRLRLVVK AETTSSSSFM
2160 2170 2180 2190 2200
AVNLILQDVN DNRPRFQLQN YVTYMHEAQG YDFPIIQVVA EDVDQGQNGQ
2210 2220 2230 2240 2250
VTYTIESSNQ SGLFKIDPQT GSITTTAIMD REIWTQAKLV IKATDRGSPK
2260 2270 2280 2290 2300
LVGTATITVI IVDLNDNSPT IPVPREVRVP ENSLIGTEIT LVTGNDVDSG
2310 2320 2330 2340 2350
PVLSYSLQLD ASTQGKFDID RYNGRVSLTA PLDYEERTWY KLTIRASDSK
2360 2370 2380 2390 2400
HQSEANLTVV VEDVNDNVPT FTQDLYQVTL PEHSPPGSPV ITVTATDRDS
2410 2420 2430 2440 2450
GENGKVSYRV LSSTRDGFYV DPKNGTLFIR QKAKFDPEEP SVSIVIEARD
2460 2470 2480 2490 2500
GGSPPLSSSA TVQVQLMDVN DNAPIFHQLE YKATVSEDQL PGATILTLEA
2510 2520 2530 2540 2550
VDGDLSQENS GFDFAIASGN VGNAFQIESS VRFIEGHGFQ TVGTLILAER
2560 2570 2580 2590 2600
LDFEALSHYN LTVSVSDRGV PQRSSSVPAI ITVTDVNDNP PVFGRAEYIV
2610 2620 2630 2640 2650
ALSEGAAAGA EILRVTATDP DSAPYAEVQY SISSGDDMKL FSVDQWTGAM
2660 2670 2680 2690 2700
KLQRPLDRES QNSHVVIVQA SDGHGRFALA PISVEVKDIN DNRPYFPIAT
2710 2720 2730 2740 2750
LTASIRENQP LNSAVTVLHA IDYDTGVYGQ LKYYLMDHSS PGKDLFFVDQ
2760 2770 2780 2790 2800
NSGEVRTKQI FDFEKVNSFN FIALAVDAGN NSATVTVQVF ITGEDEYDPV
2810 2820 2830 2840 2850
FTTSDLSFEV PEGAKKGQSI GLVQAKDEDG GVDGIVLYSF PNSSPYFDVN
2860 2870 2880 2890 2900
KTTGVIYLKM DNSGSSSGGS RSKRETRLMT MDVSAHSPLD TSRVASAQVI
2910 2920 2930 2940 2950
IDVTNTSFGL ATDFNILLVS IIAASLGVIV LLVIIAVALY LVRSKRKKKG
2960 2970 2980 2990 3000
QDAGNSTASS GTALQKLDES KPSGSDRIYH QALPGYAGDE EGTGAGSYTR
3010 3020 3030 3040 3050
GGSLDPSHSS GRGSAEAAED DEIRMINEYP RVASITSSMQ EHISARGPDS
3060 3070 3080 3090 3100
GIQQDADQLS DISCEPGPLD ASQWFKSKKL GSISGSLSGT LLSGQLPVYR
3110 3120 3130 3140 3150
DEGGGYLGVG RGLNISHPKD YAFPEDGKPP VDGSLTAIVA SDEELRGSYN
3160 3170 3180 3190 3200
WDYLLNWCPQ FQPLASVFTE IARLKDESLP PNNPRRPFQP KIKTDPKPRI
3210 3220 3230 3240 3250
DPPPLITSVA HPGAKSVPPK PAITRTFHTL ASLRRSPISH EGSISSAAMS
3260 3270 3280 3290
PSFSPSLSPL AARSPAVSPF GVTQGPSASI ISTTEHTLEH TDEAEMRI
Length:3,298
Mass (Da):357,287
Last modified:January 20, 2016 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i01D83AE166536975
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F1QXA3F1QXA3_DANRE
Dachsous cadherin-related 1b
dchs1b dchs1
921Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
E9QEN9E9QEN9_DANRE
Dachsous cadherin-related 1b
dchs1b dchs1
274Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
BX530069 Genomic DNA No translation available.
CT027781 Genomic DNA No translation available.
CT573170 Genomic DNA No translation available.

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSDART00000128894; ENSDARP00000109139; ENSDARG00000079850

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX530069 Genomic DNA No translation available.
CT027781 Genomic DNA No translation available.
CT573170 Genomic DNA No translation available.

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000109139

Proteomic databases

PaxDbiF1QGX1

Genome annotation databases

EnsembliENSDART00000128894; ENSDARP00000109139; ENSDARG00000079850

Organism-specific databases

ZFINiZDB-GENE-050208-41, dchs1b

Phylogenomic databases

eggNOGiKOG3594, Eukaryota
GeneTreeiENSGT00940000163671
HOGENOMiCLU_000265_2_0_1
InParanoidiF1QGX1
OMAiERYFVID
TreeFamiTF316403

Gene expression databases

BgeeiENSDARG00000079850, Expressed in embryo and 38 other tissues
ExpressionAtlasiF1QGX1, baseline

Family and domain databases

InterProiView protein in InterPro
IPR002126, Cadherin-like_dom
IPR015919, Cadherin-like_sf
IPR020894, Cadherin_CS
PfamiView protein in Pfam
PF00028, Cadherin, 25 hits
PRINTSiPR00205, CADHERIN
SMARTiView protein in SMART
SM00112, CA, 26 hits
SUPFAMiSSF49313, SSF49313, 27 hits
PROSITEiView protein in PROSITE
PS00232, CADHERIN_1, 13 hits
PS50268, CADHERIN_2, 27 hits

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiF1QGX1_DANRE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: F1QGX1
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: January 20, 2016
Last modified: June 2, 2021
This is version 69 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
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