UniProtKB - F1QBN1 (F1QBN1_DANRE)
Protein
Submitted name:
Solute carrier family 5 member 6
Gene
slc5a6b
Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Functioni
GO - Molecular functioni
- sodium-dependent multivitamin transmembrane transporter activity Source: GO_Central
- symporter activity Source: GO_Central
GO - Biological processi
- biotin transport Source: GO_Central
- pantothenate transmembrane transport Source: GO_Central
- sodium ion transport Source: GO_Central
Names & Taxonomyi
Protein namesi | Submitted name: Solute carrier family 5 member 6Imported |
Gene namesi | Name:slc5a6bImported |
Organismi | Danio rerio (Zebrafish) (Brachydanio rerio)Imported |
Taxonomic identifieri | 7955 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Danionidae › Danioninae › Danio |
Proteomesi |
|
Organism-specific databases
ZFINi | ZDB-GENE-050913-86, slc5a6b |
Subcellular locationi
Other locations
- Membrane ARBA annotation; Multi-pass membrane protein ARBA annotation
Other locations
- integral component of membrane Source: UniProtKB-KW
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transmembranei | 12 – 33 | HelicalSequence analysisAdd BLAST | 22 | |
Transmembranei | 53 – 72 | HelicalSequence analysisAdd BLAST | 20 | |
Transmembranei | 84 – 107 | HelicalSequence analysisAdd BLAST | 24 | |
Transmembranei | 128 – 147 | HelicalSequence analysisAdd BLAST | 20 | |
Transmembranei | 159 – 181 | HelicalSequence analysisAdd BLAST | 23 | |
Transmembranei | 193 – 211 | HelicalSequence analysisAdd BLAST | 19 | |
Transmembranei | 240 – 258 | HelicalSequence analysisAdd BLAST | 19 | |
Transmembranei | 279 – 302 | HelicalSequence analysisAdd BLAST | 24 | |
Transmembranei | 339 – 360 | HelicalSequence analysisAdd BLAST | 22 | |
Transmembranei | 381 – 402 | HelicalSequence analysisAdd BLAST | 22 | |
Transmembranei | 408 – 432 | HelicalSequence analysisAdd BLAST | 25 | |
Transmembranei | 439 – 461 | HelicalSequence analysisAdd BLAST | 23 | |
Transmembranei | 509 – 530 | HelicalSequence analysisAdd BLAST | 22 |
Keywords - Cellular componenti
MembraneExpressioni
Gene expression databases
Bgeei | ENSDARG00000014599, Expressed in liver and 32 other tissues |
ExpressionAtlasi | F1QBN1, baseline |
Family & Domainsi
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 572 – 594 | DisorderedSequence analysisAdd BLAST | 23 |
Sequence similaritiesi
Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. [View classification]UniRule annotationARBA annotation
Keywords - Domaini
Transmembrane, Transmembrane helixSequence analysisARBA annotationPhylogenomic databases
GeneTreei | ENSGT00940000155731 |
HOGENOMi | CLU_018808_11_1_1 |
Family and domain databases
Gene3Di | 1.20.1730.10, 1 hit |
InterProi | View protein in InterPro IPR038377, Na/Glc_symporter_sf IPR001734, Na/solute_symporter IPR018212, Na/solute_symporter_CS |
Pfami | View protein in Pfam PF00474, SSF, 1 hit |
TIGRFAMsi | TIGR00813, sss, 1 hit |
PROSITEi | View protein in PROSITE PS00456, NA_SOLUT_SYMP_1, 1 hit PS50283, NA_SOLUT_SYMP_3, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All
F1QBN1-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MDPAGHKYFT VIDYVIFGLL LVASMSIGLY YAFTGGRQST TQEFLIADRS
60 70 80 90 100
MKCLPLSLSL MATFQSAVAI IGTPAEVYAH GTQYWFIGCS YVLGLLIPAH
110 120 130 140 150
IFIPLFYRLH LTSVYQYLEL RFCKAVRICG TVTFIFQMVI YMGVGIYTPA
160 170 180 190 200
LALNAVTGFH LWGAVLATGL VCTLYTALGG LKAVVWTDVF QTVVMFTGQL
210 220 230 240 250
AVIIVGVHQA GGLSEAWGKV RDGGRISGID LNPDPTVRHT FWTLAVGGVF
260 270 280 290 300
LMLSLYGVNQ AQVQRYLSSR TEREAVMSCY MVFPCLQLAL LLSCLMGLVM
310 320 330 340 350
FACYGQNSPV EQQYITSKDQ MVLYFVMDML QNFPGLPGLF VACLFSASLS
360 370 380 390 400
TISSAFNSLA TVTMVDLIKP HYSMTEARAT LLSKLLALSY GIICLAMAYL
410 420 430 440 450
VHLMNSSVLQ AALSIFGMIG GPLLGLFCLG IFFPCANSIG AVTGLSAGLL
460 470 480 490 500
MAFWVGIGGF LTRMPSPVIP LLNSTITVPD VSENITAATA ELEADSRSAG
510 520 530 540 550
LHGFYSLSYM WYSALSSCTV LIVGLIISCI TGPTKGDDVA SGTVYPVVKT
560 570 580 590 600
AQSYLKPSTC CKTTAEHKVD GQKEMNGTVK EDAGSQEETQ RFLPDVELET
SV
Computationally mapped potential isoform sequencesi
There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketB7ZVD9 | B7ZVD9_DANRE | Solute carrier family 5 member 6 | slc5a6b slc5a6, zgc:114067 | 603 | Annotation score: | ||
A9JSZ5 | A9JSZ5_DANRE | Solute carrier family 5 member 6 | slc5a6b slc5a6, zgc:114067 | 602 | Annotation score: | ||
A0A2R8PV56 | A0A2R8PV56_DANRE | Solute carrier family 5 member 6 | slc5a6b | 586 | Annotation score: |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BX005321 Genomic DNA No translation available. CR626881 Genomic DNA No translation available. |
Genome annotation databases
Ensembli | ENSDART00000062952; ENSDARP00000062951; ENSDARG00000014599 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BX005321 Genomic DNA No translation available. CR626881 Genomic DNA No translation available. |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Genome annotation databases
Ensembli | ENSDART00000062952; ENSDARP00000062951; ENSDARG00000014599 |
Organism-specific databases
ZFINi | ZDB-GENE-050913-86, slc5a6b |
Phylogenomic databases
GeneTreei | ENSGT00940000155731 |
HOGENOMi | CLU_018808_11_1_1 |
Gene expression databases
Bgeei | ENSDARG00000014599, Expressed in liver and 32 other tissues |
ExpressionAtlasi | F1QBN1, baseline |
Family and domain databases
Gene3Di | 1.20.1730.10, 1 hit |
InterProi | View protein in InterPro IPR038377, Na/Glc_symporter_sf IPR001734, Na/solute_symporter IPR018212, Na/solute_symporter_CS |
Pfami | View protein in Pfam PF00474, SSF, 1 hit |
TIGRFAMsi | TIGR00813, sss, 1 hit |
PROSITEi | View protein in PROSITE PS00456, NA_SOLUT_SYMP_1, 1 hit PS50283, NA_SOLUT_SYMP_3, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | F1QBN1_DANRE | |
Accessioni | F1QBN1Primary (citable) accession number: F1QBN1 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | May 3, 2011 |
Last sequence update: | May 3, 2011 | |
Last modified: | October 7, 2020 | |
This is version 55 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |