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Protein
Submitted name:

Atonal bHLH transcription factor 8

Gene

ATOH8

Organism
Bos taurus (Bovine)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Atonal bHLH transcription factor 8Imported
Gene namesi
Name:ATOH8Imported
OrganismiBos taurus (Bovine)Imported
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 11

Organism-specific databases

VGNCiVGNC:26272 ATOH8

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiF1MPZ6
PRIDEiF1MPZ6

Expressioni

Gene expression databases

BgeeiENSBTAG00000024000 Expressed in 9 organ(s), highest expression level in liver

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000032978

Structurei

3D structure databases

SMRiF1MPZ6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini226 – 278BHLHInterPro annotationAdd BLAST53

Phylogenomic databases

eggNOGiENOG410IQ4E Eukaryota
ENOG4111WSZ LUCA
GeneTreeiENSGT00680000099860
InParanoidiF1MPZ6
KOiK09084
OMAiETQPFRE
OrthoDBiEOG091G167Y
TreeFamiTF324848

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR032660 ATOH8
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
PANTHERiPTHR19290:SF102 PTHR19290:SF102, 1 hit
PfamiView protein in Pfam
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit

Sequencei

Sequence statusi: Complete.

F1MPZ6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKHIPVLQDG PWKTVCVKEL NGLKKLKRKG KEPARRANGY KTFRLDLEAP
60 70 80 90 100
EHGATATNGL RDRTQRLQPV PTPVPARVAP AVPSGGGADT AGERGGARAP
110 120 130 140 150
EVLDPRKRGF ALGAVGPGLP TPPPPPPPPA PQGQVPGGPE TQPFREPGLR
160 170 180 190 200
PRILLCAPPA RPTPSAPPAP PEPSVRPAPP TRPGESSYSS ISHVIYNNHP
210 220 230 240 250
DSSASPRKRP GEATAASSEI KALQQTRRLL ANARERTRVH TISAAFEALR
260 270 280 290 300
KQVPCYSYGQ KLSKLAILRI ACNYILSLAR LADLDYSADH SNLSFSECVQ
310
RCTRTLQAEG RAKKRKE
Length:317
Mass (Da):34,119
Last modified:November 16, 2011 - v2
Checksum:iEB2B34DE9A96FBA0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DAAA02031125 Genomic DNA No translation available.
DAAA02031126 Genomic DNA No translation available.
RefSeqiNP_001180033.1, NM_001193104.1

Genome annotation databases

EnsembliENSBTAT00000033053; ENSBTAP00000032978; ENSBTAG00000024000
GeneIDi616225
KEGGibta:616225

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DAAA02031125 Genomic DNA No translation available.
DAAA02031126 Genomic DNA No translation available.
RefSeqiNP_001180033.1, NM_001193104.1

3D structure databases

SMRiF1MPZ6
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000032978

Proteomic databases

PaxDbiF1MPZ6
PRIDEiF1MPZ6

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSBTAT00000033053; ENSBTAP00000032978; ENSBTAG00000024000
GeneIDi616225
KEGGibta:616225

Organism-specific databases

CTDi84913
VGNCiVGNC:26272 ATOH8

Phylogenomic databases

eggNOGiENOG410IQ4E Eukaryota
ENOG4111WSZ LUCA
GeneTreeiENSGT00680000099860
InParanoidiF1MPZ6
KOiK09084
OMAiETQPFRE
OrthoDBiEOG091G167Y
TreeFamiTF324848

Gene expression databases

BgeeiENSBTAG00000024000 Expressed in 9 organ(s), highest expression level in liver

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR032660 ATOH8
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
PANTHERiPTHR19290:SF102 PTHR19290:SF102, 1 hit
PfamiView protein in Pfam
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiF1MPZ6_BOVIN
AccessioniPrimary (citable) accession number: F1MPZ6
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: November 16, 2011
Last modified: November 7, 2018
This is version 48 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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