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UniProtKB - F1M9Z0 (F1M9Z0_RAT)
Protein
Submitted name:
Zinc finger and SCAN domain-containing 2
Gene
Zscan2
Organism
Rattus norvegicus (Rat)
Status
Functioni
GO - Molecular functioni
- DNA-binding transcription activator activity, RNA polymerase II-specific Source: GO_Central
- metal ion binding Source: UniProtKB-KW
- RNA polymerase II cis-regulatory region sequence-specific DNA binding Source: GO_Central
GO - Biological processi
- regulation of transcription by RNA polymerase II Source: GO_Central
Keywordsi
Ligand | Metal-binding, Zinc |
Names & Taxonomyi
Protein namesi | Submitted name: Zinc finger and SCAN domain-containing 2 |
Gene namesi | |
Organismi | Rattus norvegicus (Rat)Imported |
Taxonomic identifieri | 10116 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Rattus |
Proteomesi |
|
Organism-specific databases
RGDi | 1584548, Zscan2 |
Subcellular locationi
Nucleus
- Nucleus PROSITE-ProRule annotation
Nucleus
- nucleus Source: GO_Central
Keywords - Cellular componenti
NucleusPROSITE-ProRule annotationARBA annotationExpressioni
Gene expression databases
Bgeei | ENSRNOG00000022164, Expressed in testis and 21 other tissues |
Structurei
Family & Domainsi
Sequence similaritiesi
Belongs to the krueppel C2H2-type zinc-finger protein family.ARBA annotation
Keywords - Domaini
Zinc-fingerPROSITE-ProRule annotationPhylogenomic databases
eggNOGi | KOG1721, Eukaryota |
GeneTreei | ENSGT00940000161710 |
HOGENOMi | CLU_002678_57_1_1 |
OMAi | ILLMHQR |
OrthoDBi | 1318335at2759 |
Family and domain databases
CDDi | cd07936, SCAN, 1 hit |
Gene3Di | 1.10.4020.10, 1 hit |
InterProi | View protein in InterPro IPR003309, SCAN_dom IPR038269, SCAN_sf IPR036236, Znf_C2H2_sf IPR013087, Znf_C2H2_type |
Pfami | View protein in Pfam PF02023, SCAN, 1 hit PF00096, zf-C2H2, 14 hits |
SMARTi | View protein in SMART SM00431, SCAN, 1 hit SM00355, ZnF_C2H2, 14 hits |
SUPFAMi | SSF57667, SSF57667, 8 hits |
PROSITEi | View protein in PROSITE PS50804, SCAN_BOX, 1 hit PS00028, ZINC_FINGER_C2H2_1, 14 hits PS50157, ZINC_FINGER_C2H2_2, 14 hits |
i Sequence
Sequence statusi: Complete.
F1M9Z0-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MILEDDSWVQ EAVLQEDGPE SEPFPQSTGK GSPQEEGTAE GPRGALVRFR
60 70 80 90 100
ELCRRWLRPE VHTKEQMLTV LPREIQAWLQ EHRPESSEEA VALVEDLTQT
110 120 130 140 150
FPHNDFEIQS ENGENSNQDV FEDVESHETF LKIPGGEGGQ QSDGESDFER
160 170 180 190 200
DCGSGGAQGN VPGEEHRDLP SEGREVGQLI GLQGTYLGEK PYECPQCGKT
210 220 230 240 250
FSRKSHLITH ERTHTGEKYY KCEECGKSFS DGSNFSRHQT THTGEKPYKC
260 270 280 290 300
RDCGKSFSRS ANLITHQRIH TGEKPFQCAE CGKSFSRSPN LIAHQRTHTG
310 320 330 340 350
EKPYSCPECG KSFGNRSSLN THQGIHTGEK PYACKECGES FSYNSNLIRH
360 370 380 390 400
QRIHTGEKPY KCTECGQKFS QSSALITHRR THTGEKPYQC SECGKSFSRS
410 420 430 440 450
SNLATHRRTH LVEKPYKCGV CGKSFSQSSS LIAHQGMHTG EKPYECLTCG
460 470 480 490 500
ESFSWSSNLI KHQRIHTGEK PYKCGDCGKC FSQRSQLVVH QRTHTGEKPY
510 520 530 540 550
QCLMCGKSFS RGSILVMHQR AHLGEKPYRC PECGKGFSWN SVLIIHQRIH
560 570 580
TGEKPYKCPE CGKGFSNSSN FITHQRTHLK EKLY
Sequence databases
Genome annotation databases
Ensembli | ENSRNOT00000034267.6; ENSRNOP00000029851.5; ENSRNOG00000022164.6 |
GeneIDi | 683603 |
KEGGi | rno:683603 |
Similar proteinsi
Cross-referencesi
Sequence databases
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 10116.ENSRNOP00000029851 |
Genome annotation databases
Ensembli | ENSRNOT00000034267.6; ENSRNOP00000029851.5; ENSRNOG00000022164.6 |
GeneIDi | 683603 |
KEGGi | rno:683603 |
Organism-specific databases
CTDi | 54993 |
RGDi | 1584548, Zscan2 |
Phylogenomic databases
eggNOGi | KOG1721, Eukaryota |
GeneTreei | ENSGT00940000161710 |
HOGENOMi | CLU_002678_57_1_1 |
OMAi | ILLMHQR |
OrthoDBi | 1318335at2759 |
Gene expression databases
Bgeei | ENSRNOG00000022164, Expressed in testis and 21 other tissues |
Family and domain databases
CDDi | cd07936, SCAN, 1 hit |
Gene3Di | 1.10.4020.10, 1 hit |
InterProi | View protein in InterPro IPR003309, SCAN_dom IPR038269, SCAN_sf IPR036236, Znf_C2H2_sf IPR013087, Znf_C2H2_type |
Pfami | View protein in Pfam PF02023, SCAN, 1 hit PF00096, zf-C2H2, 14 hits |
SMARTi | View protein in SMART SM00431, SCAN, 1 hit SM00355, ZnF_C2H2, 14 hits |
SUPFAMi | SSF57667, SSF57667, 8 hits |
PROSITEi | View protein in PROSITE PS50804, SCAN_BOX, 1 hit PS00028, ZINC_FINGER_C2H2_1, 14 hits PS50157, ZINC_FINGER_C2H2_2, 14 hits |
MobiDBi | Search... |
Entry informationi
Entry namei | F1M9Z0_RAT | |
Accessioni | F1M9Z0Primary (citable) accession number: F1M9Z0 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | May 3, 2011 |
Last sequence update: | May 25, 2022 | |
Last modified: | May 25, 2022 | |
This is version 85 of the entry and version 3 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |