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Protein
Submitted name:

Similar to suppressor of hairy wing homolog 4 isoform 1 (Predicted), isoform CRA_b

Gene

Zfp280d

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Similar to suppressor of hairy wing homolog 4 isoform 1 (Predicted), isoform CRA_bImported
Submitted name:
Zinc finger protein 280DImported
Gene namesi
Name:Zfp280dImported
Synonyms:RGD1560796_predictedImported
ORF Names:rCG_56624Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 8

Organism-specific databases

RGDi1560796 Zfp280d

Expressioni

Gene expression databases

BgeeiENSRNOG00000055631 Expressed in 10 organ(s), highest expression level in lung

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000051255

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini358 – 386C2H2-typeInterPro annotationAdd BLAST29

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili19 – 39Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00530000063300
OMAiMLVNDFY
OrthoDBiEOG091G01UE

Family and domain databases

InterProiView protein in InterPro
IPR025243 DUF4195
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF13836 DUF4195, 1 hit
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 9 hits
SUPFAMiSSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 1 hit

Sequencei

Sequence statusi: Complete.

F1M0V0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGDSSFQPKD NLKMAELFME CEEEELEPWQ KKVKEVEEDD DDEPIFVAEI
60 70 80 90 100
ASSKPAISNI LNRVNPSSHS RGIKNGILNR GFTASFKPTS QRCPNSASNP
110 120 130 140 150
VAALPVNFHP ESRSSDSSVI VQPFSKPGYV TNSPRVLSSN PSELLFDLTQ
160 170 180 190 200
DTGLSHYQGG PTLSIAGLNE TSFLSKRPSG SDISSVNPKK PKPNENISGT
210 220 230 240 250
DASSVVSSEK SPSVMSLQVV PSQGTNCSSN QSKNGTTFPR ACPKCNIHFN
260 270 280 290 300
LLDPLKNHMT YCCPDMINNF LGLTKTDNLN SANEAKTLDS EKGKLIMLVN
310 320 330 340 350
DFYYGKYEGD VQEEQKTHTT FKCFSCLKVL KNNIRFMNHM KHHLELEKQS
360 370 380 390 400
SESWEKHTTC QHCYRQFPTP FQLQCHIEST HTPHEFSTIC KICELSFETE
410 420 430 440 450
QILLQHMKDN HKPGEMPYIC QVCNYRSSLF SEVESHFRTS HENTKNLLCP
460 470 480 490 500
FCLKVIKIAT PYMHHYMKHQ KKGIHRCTKC RLQFLTCKEK MDHKTQHHRT
510 520 530 540 550
FVKPKQLEGL PPGTKVTIRA SVAPLQSGSS VTPSISASTS TLQLSPPRTE
560 570 580 590 600
NVTAKNHVKL NTSTPNTTIS DPSKTNEIKS NGSKSKNRSK VSNMQKKQST
610 620 630 640 650
LSNSNKKSKV NTALRNLRLR RGVHECIECS SEVKDFANHF PTYVHCSFCR
660 670 680 690 700
YNTSCSKAYV NHMMSFHSNR PSKRYCIFKK HSENLRGISL VCLNCDFLTD
710 720 730 740 750
VSGLDNMATH LSQHETHTCQ VLVEKVSVCI PTSERLSELK TEAPTKGQES
760 770 780 790 800
VSKETARHST AEREPGASHS ESKQDKAPPS EDDTGRDASV CEAAAAANRE
810 820 830 840 850
RNVTASDTED VRTSNDVLSR GPEVGTDNME KEEQAHHTCQ EMELKRDQSS
860 870 880 890 900
ESTDDQSKEH SPTEAELSSE ISQDLQLTPE GVGLGQCLRQ GEEPESVNSD
910 920 930 940 950
ASEQDSVRLE PLTPSEVLEF EATEVCHSGE DPSASTSDAV SGGTGGSPGG
960
SSPRRAESAA DLAGGQEGS
Length:969
Mass (Da):107,282
Last modified:April 3, 2013 - v2
Checksum:i7C5C6C86C740998D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07070653 Genomic DNA No translation available.
AABR07070654 Genomic DNA No translation available.
AABR07070655 Genomic DNA No translation available.
CH474041 Genomic DNA Translation: EDL84149.1
RefSeqiNP_001101635.2, NM_001108165.2
XP_017451153.1, XM_017595664.1
UniGeneiRn.162988

Genome annotation databases

EnsembliENSRNOT00000089335; ENSRNOP00000068646; ENSRNOG00000055631
ENSRNOT00000090047; ENSRNOP00000068997; ENSRNOG00000055631
GeneIDi315798
KEGGirno:315798

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07070653 Genomic DNA No translation available.
AABR07070654 Genomic DNA No translation available.
AABR07070655 Genomic DNA No translation available.
CH474041 Genomic DNA Translation: EDL84149.1
RefSeqiNP_001101635.2, NM_001108165.2
XP_017451153.1, XM_017595664.1
UniGeneiRn.162988

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000051255

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000089335; ENSRNOP00000068646; ENSRNOG00000055631
ENSRNOT00000090047; ENSRNOP00000068997; ENSRNOG00000055631
GeneIDi315798
KEGGirno:315798

Organism-specific databases

CTDi235469
RGDi1560796 Zfp280d

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00530000063300
OMAiMLVNDFY
OrthoDBiEOG091G01UE

Gene expression databases

BgeeiENSRNOG00000055631 Expressed in 10 organ(s), highest expression level in lung

Family and domain databases

InterProiView protein in InterPro
IPR025243 DUF4195
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF13836 DUF4195, 1 hit
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 9 hits
SUPFAMiSSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiF1M0V0_RAT
AccessioniPrimary (citable) accession number: F1M0V0
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: April 3, 2013
Last modified: September 12, 2018
This is version 56 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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