Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

GLIS family zinc finger 1

Gene

Glis1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
GLIS family zinc finger 1Imported
Gene namesi
Name:Glis1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 5

Organism-specific databases

RGDi1308030 Glis1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiF1LVY3
PRIDEiF1LVY3

Expressioni

Gene expression databases

BgeeiENSRNOG00000000138 Expressed in 8 organ(s), highest expression level in adult mammalian kidney
ExpressionAtlasiF1LVY3 baseline and differential

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000036043

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini319 – 351C2H2-typeInterPro annotationAdd BLAST33
Domaini352 – 381C2H2-typeInterPro annotationAdd BLAST30
Domaini382 – 411C2H2-typeInterPro annotationAdd BLAST30
Domaini412 – 441C2H2-typeInterPro annotationAdd BLAST30

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00900000140802
OMAiLRPNGYH
OrthoDBiEOG091G0IZP
TreeFamiTF350216

Family and domain databases

InterProiView protein in InterPro
IPR030430 GLIS1
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PANTHERiPTHR19818:SF93 PTHR19818:SF93, 1 hit
PfamiView protein in Pfam
PF00096 zf-C2H2, 3 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 5 hits
SUPFAMiSSF57667 SSF57667, 3 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 4 hits
PS50157 ZINC_FINGER_C2H2_2, 4 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

F1LVY3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
VNGSYGHSSE KSLLDLDLAE GPSPSCHQGL FLPAGTPPPR GHPPVCERLL
60 70 80 90 100
HFPHPNRSPR PQATYANGSL PAAQHIKQEA LPDYQAMVSA HTPLPTHCRA
110 120 130 140 150
PLSMGLHSDL DFPGRGLTNP APSCYLVGNE PISSLGPQPE AHLPEGSLKR
160 170 180 190 200
CCLLGLPPTS SASSSPCASS DINPVIHSSQ TALVSCVNGL RSPPLPGDLG
210 220 230 240 250
GPPKRSRHGP GPGPVSSDGQ EGSLQLEACR KSGFLKQEPM DEFSELFAPH
260 270 280 290 300
QQGLPPPYPL PQLPTGPSLG GLGLGLAGRM AAGRQACRWV DCCAAYEQQE
310 320 330 340 350
ELVRHIEKSH IDQRKGEDFT CFWAGCVRRY KPFNARYKLL IHMRVHSGEK
360 370 380 390 400
PNKCMFEGCS KAFSRLENLK IHLRSHTGEK PYLCQHPGCQ KAFSNSSDRA
410 420 430 440 450
KHQRTHLDTK PYACQIPGCS KRYTDPSSLR KHVKAHSAKE QQVRKKLHTG
460 470 480 490 500
ADPEAAVLSE CLALQQLQAS TPLPASRGKG SQTLSQELLP GVYPGSVTPQ
510 520 530 540 550
NGLASGILSP SHDVPSRHHP LEVTTGSHHH LSPLPTAEST RDGLGPGLLS
560 570 580 590 600
PMVSPLKGLG PPPLPPASQS QSPGAQSFST IPSKPTYPPF QSPPPPLPSP
610 620 630 640 650
QGYQGSFHSI QNCFPYADCY RTTEPAASRD GLVGDAHGFN PLRPSTYSSL
660 670 680 690 700
STPLSAPGYE ALAETPCPTL QPQPSEDLVS SGPEDCGFFP NGAFDHCLSH

IPSIYTDT
Length:708
Mass (Da):75,724
Last modified:July 22, 2015 - v3
Checksum:iF29A385821AE5305
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
M0R4C0M0R4C0_RAT
GLIS family zinc finger 1
Glis1
583Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07049535 Genomic DNA No translation available.
AABR07049536 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSRNOT00000032433; ENSRNOP00000036043; ENSRNOG00000000138
UCSCiRGD:1308030 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07049535 Genomic DNA No translation available.
AABR07049536 Genomic DNA No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000036043

Proteomic databases

PaxDbiF1LVY3
PRIDEiF1LVY3

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000032433; ENSRNOP00000036043; ENSRNOG00000000138
UCSCiRGD:1308030 rat

Organism-specific databases

RGDi1308030 Glis1

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00900000140802
OMAiLRPNGYH
OrthoDBiEOG091G0IZP
TreeFamiTF350216

Gene expression databases

BgeeiENSRNOG00000000138 Expressed in 8 organ(s), highest expression level in adult mammalian kidney
ExpressionAtlasiF1LVY3 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR030430 GLIS1
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PANTHERiPTHR19818:SF93 PTHR19818:SF93, 1 hit
PfamiView protein in Pfam
PF00096 zf-C2H2, 3 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 5 hits
SUPFAMiSSF57667 SSF57667, 3 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 4 hits
PS50157 ZINC_FINGER_C2H2_2, 4 hits
ProtoNetiSearch...

Entry informationi

Entry nameiF1LVY3_RAT
AccessioniPrimary (citable) accession number: F1LVY3
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: July 22, 2015
Last modified: October 10, 2018
This is version 61 of the entry and version 3 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again