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UniProtKB - F1LQ83 (F1LQ83_RAT)
Protein
Submitted name:
Achaete-scute family bHLH transcription factor 3
Gene
Tmem9b
Organism
Rattus norvegicus (Rat)
Status
Names & Taxonomyi
Protein namesi | Submitted name: Achaete-scute family bHLH transcription factor 3 |
Gene namesi | |
Organismi | Rattus norvegicus (Rat)Imported |
Taxonomic identifieri | 10116 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Rattus |
Proteomesi |
|
Organism-specific databases
RGDi | 621631, Ascl3 1310775, Tmem9b |
Subcellular locationi
Lysosome
- lysosomal membrane Source: InterPro
Other locations
- integral component of membrane Source: UniProtKB-KW
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transmembranei | 106 – 125 | HelicalSequence analysisAdd BLAST | 20 |
Keywords - Cellular componenti
MembranePTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Signal peptidei | 1 – 34 | Sequence analysisAdd BLAST | 34 |
Expressioni
Gene expression databases
Bgeei | ENSRNOG00000013591, Expressed in duodenum and 21 other tissues |
Structurei
Family & Domainsi
Sequence similaritiesi
Belongs to the TMEM9 family.ARBA annotation
Keywords - Domaini
SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysisARBA annotationPhylogenomic databases
GeneTreei | ENSGT00390000000819 |
HOGENOMi | CLU_093267_2_0_1 |
OMAi | CKYESRN |
OrthoDBi | 1380345at2759 |
TreeFami | TF322889 |
Family and domain databases
InterProi | View protein in InterPro IPR008853, TMEM9/TMEM9B |
PANTHERi | PTHR13064, PTHR13064, 1 hit |
Pfami | View protein in Pfam PF05434, Tmemb_9, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All
F1LQ83-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MDTRSYPSPP DRLSVFAESA HLPLSRPFYL DPMVTVHLCP DAPVPAPYTD
60 70 80 90 100
ELPLLPFSSD TLIMDNYGDP YPFPFPMPYT NYRRCDYTYG PAFIRKRNER
110 120 130 140 150
ERQRVKCVNE GYARLRRHLP EDYLEKRLSK VETLRAAIKY ISYLQSLLYP
160 170
DETETKKNPR TTNCGSLDPA LRVI
Computationally mapped potential isoform sequencesi
There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basketD3ZW49 | D3ZW49_RAT | TMEM9 domain family, member B | Tmem9b Tmem9b_predicted, rCG_40366 | 199 | Annotation score: |
Sequence databases
RefSeqi | XP_017444476.1, XM_017588987.1 |
Genome annotation databases
Similar proteinsi
Cross-referencesi
Sequence databases
RefSeqi | XP_017444476.1, XM_017588987.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 10116.ENSRNOP00000018309 |
Genome annotation databases
Organism-specific databases
CTDi | 56674 |
RGDi | 621631, Ascl3 1310775, Tmem9b |
Phylogenomic databases
GeneTreei | ENSGT00390000000819 |
HOGENOMi | CLU_093267_2_0_1 |
OMAi | CKYESRN |
OrthoDBi | 1380345at2759 |
TreeFami | TF322889 |
Gene expression databases
Bgeei | ENSRNOG00000013591, Expressed in duodenum and 21 other tissues |
Family and domain databases
InterProi | View protein in InterPro IPR008853, TMEM9/TMEM9B |
PANTHERi | PTHR13064, PTHR13064, 1 hit |
Pfami | View protein in Pfam PF05434, Tmemb_9, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | F1LQ83_RAT | |
Accessioni | F1LQ83Primary (citable) accession number: F1LQ83 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | May 3, 2011 |
Last sequence update: | May 25, 2022 | |
Last modified: | May 25, 2022 | |
This is version 87 of the entry and version 3 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |