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Protein
Submitted name:

TMEM9 domain family, member B

Gene

Tmem9b

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
TMEM9 domain family, member BImported
Submitted name:
TMEM9 domain family, member B (Predicted), isoform CRA_bImported
Gene namesi
Name:Tmem9bImported
Synonyms:Ascl3Imported, Tmem9b_predictedImported
ORF Names:rCG_40366Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi1310775 Tmem9b

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei106 – 125HelicalSequence analysisAdd BLAST20

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 34Sequence analysisAdd BLAST34
ChainiPRO_501528996335 – 199Sequence analysisAdd BLAST165

Proteomic databases

PRIDEiF1LQ83

Expressioni

Gene expression databases

BgeeiENSRNOG00000013591 Expressed in 10 organ(s), highest expression level in brain
ExpressionAtlasiF1LQ83 baseline and differential

Family & Domainsi

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG4029 Eukaryota
ENOG411227D LUCA
GeneTreeiENSGT00390000000819
InParanoidiF1LQ83
OMAiHSRPNML
OrthoDBiEOG091G0MBS
TreeFamiTF322889

Family and domain databases

InterProiView protein in InterPro
IPR008853 TMEM9
PANTHERiPTHR13064 PTHR13064, 1 hit
PfamiView protein in Pfam
PF05434 Tmemb_9, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

F1LQ83-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MASLWCGSLL RLGSGLSMSC LALYVLLLAP LTGAAKNFED VRCKCICPPY
60 70 80 90 100
KENPGHIYNK NISQKDCDCL HVVEPMPVRG PDVEAYCLRC ECKYEERSSV
110 120 130 140 150
TIKVTIIIYL SILGLLLLYM VYLTLVEPIL KRRLFGHSQL LQSDDDIGDH
160 170 180 190
QPFANAHDVL ARSRSRANVL NKVEYAQQRW KLQVQEQRKS VFDRHVVLS
Length:199
Mass (Da):22,639
Last modified:July 22, 2015 - v2
Checksum:i2D215D1BF04F76D1
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
D3ZW49D3ZW49_RAT
TMEM9 domain family, member B
Tmem9b Tmem9b_predicted, rCG_40366
124Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07005006 Genomic DNA No translation available.
AABR07005007 Genomic DNA No translation available.
CH473956 Genomic DNA Translation: EDM17891.1
RefSeqiXP_017444476.1, XM_017588987.1
UniGeneiRn.204216

Genome annotation databases

EnsembliENSRNOT00000018309; ENSRNOP00000018309; ENSRNOG00000013591
GeneIDi293415

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07005006 Genomic DNA No translation available.
AABR07005007 Genomic DNA No translation available.
CH473956 Genomic DNA Translation: EDM17891.1
RefSeqiXP_017444476.1, XM_017588987.1
UniGeneiRn.204216

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiF1LQ83

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000018309; ENSRNOP00000018309; ENSRNOG00000013591
GeneIDi293415

Organism-specific databases

CTDi56674
RGDi1310775 Tmem9b

Phylogenomic databases

eggNOGiKOG4029 Eukaryota
ENOG411227D LUCA
GeneTreeiENSGT00390000000819
InParanoidiF1LQ83
OMAiHSRPNML
OrthoDBiEOG091G0MBS
TreeFamiTF322889

Gene expression databases

BgeeiENSRNOG00000013591 Expressed in 10 organ(s), highest expression level in brain
ExpressionAtlasiF1LQ83 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR008853 TMEM9
PANTHERiPTHR13064 PTHR13064, 1 hit
PfamiView protein in Pfam
PF05434 Tmemb_9, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiF1LQ83_RAT
AccessioniPrimary (citable) accession number: F1LQ83
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: July 22, 2015
Last modified: November 7, 2018
This is version 68 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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