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Protein
Submitted name:

Zinc finger protein (C2H2 type) 276

Gene

Zfp276

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

  • DNA-binding transcription factor activity Source: GO_Central
  • transcription regulatory region DNA binding Source: GO_Central
  • zinc ion binding Source: InterPro

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger protein (C2H2 type) 276Imported
Gene namesi
Name:Zfp276Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 19

Organism-specific databases

RGDi1307469 Zfp276

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiF1LN08
PRIDEiF1LN08

Expressioni

Gene expression databases

BgeeiENSRNOG00000016631 Expressed in 9 organ(s), highest expression level in liver
GenevisibleiF1LN08 RN

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000022324

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini462 – 492C2H2-typeInterPro annotationAdd BLAST31
Domaini493 – 520C2H2-typeInterPro annotationAdd BLAST28
Domaini521 – 548C2H2-typeInterPro annotationAdd BLAST28
Domaini551 – 579C2H2-typeInterPro annotationAdd BLAST29

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00530000063153
InParanoidiF1LN08
OMAiIQAVWGC
OrthoDBiEOG091G04WK
TreeFamiTF332664

Family and domain databases

InterProiView protein in InterPro
IPR012934 Znf_AD
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF07776 zf-AD, 1 hit
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 5 hits
SUPFAMiSSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 4 hits

Sequencei

Sequence statusi: Complete.

F1LN08-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKRDRLGRFL SPGIARQRGS SGSSCGSGRT RGRPSRTGGS SADGAAPQLS
60 70 80 90 100
WGSTRSCGDT GEDGTDEAGA GRTLTMGHCR LCHGKFSSRS LRSISERVPG
110 120 130 140 150
ETSERLSPGE RVFIRDFQRL LGVAVHQDPA LPQFVCKNCY TQFYQCHSLL
160 170 180 190 200
RSFLQRVNVS PAGQRKPCTK VGVQPPTVAE EGACMADLIT SSPQCLHGLV
210 220 230 240 250
GWVHEHAVNC GCLPSLQRTL SSEYCGVIQA VWGCDQGHDF TMDTDSGCRA
260 270 280 290 300
LLLDSALAVK WGKELAPRLA QSSASDPTGA ASQLCQARET QVGSETKTLP
310 320 330 340 350
SVDVALLHSH GDSVGPGLSP YIQPNLAPSE APGQLGEKQV PSSTSDDRVK
360 370 380 390 400
DEFSDLSEGD VLSEDDSDKK QTPQSSDESF EPYPEKKVSG KKSEGKEAKR
410 420 430 440 450
PEEPKIRKKP GPKPGWKKKL RCEREELPTI YKCPYQGCTA VYRGADGMKK
460 470 480 490 500
HIKEHHEEVR ERPCPHPGCN KVFMIDRYLQ RHVKLIHTEV RNYICDECGQ
510 520 530 540 550
TFKQRKHLLV HQMRHSGAKP LQCEVCGFQC RQRASLKYHM TKHKAETELD
560 570 580 590 600
FACDQCGRRF EKAHNLNVHM SMVHPLTQTQ ALPLEAEPPP GPLSLAGTVE

GQAVKPEPT
Length:609
Mass (Da):66,839
Last modified:May 3, 2011 - v1
Checksum:i686F1DA402D75171
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC115273 Genomic DNA No translation available.
RefSeqiXP_002725470.1, XM_002725424.5
XP_002728649.1, XM_002728603.5
UniGeneiRn.140797

Genome annotation databases

EnsembliENSRNOT00000022324; ENSRNOP00000022324; ENSRNOG00000016631
GeneIDi307924
KEGGirno:307924

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC115273 Genomic DNA No translation available.
RefSeqiXP_002725470.1, XM_002725424.5
XP_002728649.1, XM_002728603.5
UniGeneiRn.140797

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000022324

Proteomic databases

PaxDbiF1LN08
PRIDEiF1LN08

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000022324; ENSRNOP00000022324; ENSRNOG00000016631
GeneIDi307924
KEGGirno:307924

Organism-specific databases

CTDi57247
RGDi1307469 Zfp276

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00530000063153
InParanoidiF1LN08
OMAiIQAVWGC
OrthoDBiEOG091G04WK
TreeFamiTF332664

Gene expression databases

BgeeiENSRNOG00000016631 Expressed in 9 organ(s), highest expression level in liver
GenevisibleiF1LN08 RN

Family and domain databases

InterProiView protein in InterPro
IPR012934 Znf_AD
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF07776 zf-AD, 1 hit
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 5 hits
SUPFAMiSSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 4 hits
ProtoNetiSearch...

Entry informationi

Entry nameiF1LN08_RAT
AccessioniPrimary (citable) accession number: F1LN08
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: November 7, 2018
This is version 49 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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