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Protein
Submitted name:

Transformer-2 protein homolog alpha

Gene

Tra2a

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transformer-2 protein homolog alphaImported
Gene namesi
Name:Tra2aImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 6

Organism-specific databases

MGIiMGI:1933972 Tra2a

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

MaxQBiE9QP00
PeptideAtlasiE9QP00
PRIDEiE9QP00

Expressioni

Gene expression databases

BgeeiENSMUSG00000029817 Expressed in 283 organ(s), highest expression level in pineal body
ExpressionAtlasiE9QP00 baseline and differential
GenevisibleiE9QP00 MM

Structurei

3D structure databases

ProteinModelPortaliE9QP00
SMRiE9QP00
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini117 – 195RRMInterPro annotationAdd BLAST79

Phylogenomic databases

eggNOGiENOG410IQWZ Eukaryota
ENOG4111HSX LUCA
GeneTreeiENSGT00710000106295
OrthoDBiEOG091G0Y02
TreeFamiTF106265

Family and domain databases

Gene3Di3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 1 hit
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All

E9QP00-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSDVEENNFE GRESRSQSKS PTGTPARVKS ESRSGSRSPS RVSKHSESHS
60 70 80 90 100
RSRSKSRSRS RRHSHRRYTR SRSHSHRRRS RSRSYTPEYR RRRSRSHSPM
110 120 130 140 150
SNRRRHTGSR ANPDPNTCLG VFGLSLYTTE RDLREVFSRY GPLSGVNVVY
160 170 180 190 200
DQRTGRSRGF AFVYFERIDD SKEAMERANG MELDGRRIRV DYSITKRAHT
210 220 230 240 250
PTPGIYMGRP THSGGGGGGG GGGGGGGGGG GRRRDSYYDR GYDRGYDRYE
260 270 280
DYDYRYRRRS PSPYYSRYRS RSRSRSYSPR RY
Length:282
Mass (Da):32,579
Last modified:April 5, 2011 - v1
Checksum:i9C2DC044A283838B
GO

Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q6PFR5TRA2A_MOUSE
Transformer-2 protein homolog alpha
Tra2a
281Annotation score:
A0A0N4SVC2A0A0N4SVC2_MOUSE
Transformer-2 protein homolog alpha
Tra2a
280Annotation score:
A0A0N4SV13A0A0N4SV13_MOUSE
Transformer-2 protein homolog alpha
Tra2a
59Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC158667 Genomic DNA No translation available.
RefSeqiNP_932770.2, NM_198102.2
UniGeneiMm.196598

Genome annotation databases

EnsembliENSMUST00000031841; ENSMUSP00000031841; ENSMUSG00000029817
GeneIDi101214
UCSCiuc009bwl.1 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC158667 Genomic DNA No translation available.
RefSeqiNP_932770.2, NM_198102.2
UniGeneiMm.196598

3D structure databases

ProteinModelPortaliE9QP00
SMRiE9QP00
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiE9QP00
PeptideAtlasiE9QP00
PRIDEiE9QP00

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000031841; ENSMUSP00000031841; ENSMUSG00000029817
GeneIDi101214
UCSCiuc009bwl.1 mouse

Organism-specific databases

CTDi29896
MGIiMGI:1933972 Tra2a

Phylogenomic databases

eggNOGiENOG410IQWZ Eukaryota
ENOG4111HSX LUCA
GeneTreeiENSGT00710000106295
OrthoDBiEOG091G0Y02
TreeFamiTF106265

Miscellaneous databases

ChiTaRSiTra2a mouse
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000029817 Expressed in 283 organ(s), highest expression level in pineal body
ExpressionAtlasiE9QP00 baseline and differential
GenevisibleiE9QP00 MM

Family and domain databases

Gene3Di3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 1 hit
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiE9QP00_MOUSE
AccessioniPrimary (citable) accession number: E9QP00
Entry historyiIntegrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: November 7, 2018
This is version 61 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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